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SCNpilot_BF_INOC_scaffold_90_16

Organism: SCNpilot_BF_INOC_Burkholderiales_65_44

near complete RP 52 / 55 BSCG 51 / 51 ASCG 14 / 38
Location: comp(14309..16039)

Top 3 Functional Annotations

Value Algorithm Source
type II secretory protein GspE n=1 Tax=Acidovorax radicis RepID=UPI0002377BE5 similarity UNIREF
DB: UNIREF100
  • Identity: 82.0
  • Coverage: 579.0
  • Bit_score: 953
  • Evalue 9.70e-275
General secretion pathway protein GspE {ECO:0000313|EMBL:KJA09654.1}; TaxID=80878 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovor similarity UNIPROT
DB: UniProtKB
  • Identity: 83.2
  • Coverage: 577.0
  • Bit_score: 958
  • Evalue 4.20e-276
type IV-A pilus assembly ATPase PilB similarity KEGG
DB: KEGG
  • Identity: 82.4
  • Coverage: 578.0
  • Bit_score: 951
  • Evalue 1.40e-274

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Taxonomy

Acidovorax temperans → Acidovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1731
ATGGCCACCGCCAGTCCCGTACAAAAAGACGCCCCGCTTGCGCTGCCCAGCGTGGCCCGCGCGCTCATGTCGGCGGGCAAGCTGACACAGGCCGCGGCGGAAGACGTCCTGCGCAAATCGCAGGCCAACCGCATCAGCTTCATCTCCGAGCTGGTCGGCTCCAAGACGATCGGCGCGCCCGAGCTGGCGCAGACGCTCTCCAACACTTTCGGCGCGCCGCTGCTGGACATCGACGCCATCGACACCGTCCACCTTCCCAAGGACCTGCTCGACGCCAAGCTCTGCCAGGCCTACAAGGTCATCGTACTGGCCAAGCGCAGCAACCGCCTGATCGCCATCACGGCCGACCCGACCAACCAGGAAGCCGCGGAGAAGATCAAGTTCACCACGCAACTGGGCGTGGACTGGATCGTCGGCGAGTACGACAAGCTCTCCAGGCTGGTCGACATCACGACCAAGAGCGTGGCCGAGAGCCTGGAAGGCCTCACCAGCGGCGACTTCGAATTCGACGAGACGACCGTCGAAGAGGAAGCGGAGAGCCAGGACACGGCGGGCGCCGAAGTGGAAGACGCCCCGGTGGTGCGCTTCCTGCACAAGATGCTGCTCGATGCGTTCAACATGCGCGCCTCCGACCTGCACTTCGAGCCCTACGAGCACAATTACCGCGTGCGCTTTCGCGTCGACGGCGAGCTGCAGGAGATCACCTCGCCGCCGATCGCGATCAAGGACAAGCTCGCCTCGCGCATCAAGGTGATTTCGCGCCTCGACATCTCGGAAAAGCGCGTGCCGCAGGACGGGCGCATGAAGCTCAAGGTCGGCCCCGACCGCGTCATCGATTTTCGCGTCAGCACCCTGCCCACGCTGTTCGGCGAGAAGATCGTGATCCGTATCCTCGACCCGAGCAGCGCGCGCATGGGCATCGACGCGCTCGGCTACGAGCCCGAGGAAAAGGAGCGTCTGCTCGCGGCCGTCAACCGGCCCTACGGCATGATTCTCGTGACCGGCCCCACGGGCTCGGGCAAGACGGTGTCGCTCTACACCTGCCTGAACATCCTGAACAAGCCGGGGGTGAACATCTCCACGGCCGAGGACCCGTCCGAAATCAACATGCCGGGCGTCAACCAGGTCAACGTCAACGAAAAGGCGGGGCTGACCTTCGCCGTCGCGCTCAAGGCCTTTCTGCGCCAGGACCCGGACGTGATCATGGTCGGTGAAATCCGCGACCTGGAAACCGCCGACATTGCGATCAAGGCCGCGCAGACCGGCCACCTGGTGCTCTCCACGCTGCACACCAACGATGCGCCGACCACGCTCACGCGCATGCGCAACATGGGCATCGCGCCATTCAACATCGCCTCCAGCGTGATCCTGATCACCGCCCAGCGCCTGGCGCGGCGCCTGTGCCCCCAGTGCAAGCAGCCGGCCGACATTCCCCATGAAAACCTGCTGGAGGCGGGCTACCGCGAGGAAGACATCGACGGCAGCTGGATCACCTACAAACCGGTGGGCTGCCCGGCCTGCAACAACGGCTACAAGGGCCGGGTCGGCATCTATGAAGTGATGCCGATTTCCGAGGAACTGCAGCGCATCATCCTGCAGGACGGCAGCGCGCTGGAGATCGCCGCGCAGGCACGCGCCGAGGGCGTGCGCTCCCTGCGGCAGTCGGGCCTGCAGAAGGCCAGAATGGGTTTCACCTCGCTGGAAGAGGTGCTGGCCGTGACCAACGAATAA
PROTEIN sequence
Length: 577
MATASPVQKDAPLALPSVARALMSAGKLTQAAAEDVLRKSQANRISFISELVGSKTIGAPELAQTLSNTFGAPLLDIDAIDTVHLPKDLLDAKLCQAYKVIVLAKRSNRLIAITADPTNQEAAEKIKFTTQLGVDWIVGEYDKLSRLVDITTKSVAESLEGLTSGDFEFDETTVEEEAESQDTAGAEVEDAPVVRFLHKMLLDAFNMRASDLHFEPYEHNYRVRFRVDGELQEITSPPIAIKDKLASRIKVISRLDISEKRVPQDGRMKLKVGPDRVIDFRVSTLPTLFGEKIVIRILDPSSARMGIDALGYEPEEKERLLAAVNRPYGMILVTGPTGSGKTVSLYTCLNILNKPGVNISTAEDPSEINMPGVNQVNVNEKAGLTFAVALKAFLRQDPDVIMVGEIRDLETADIAIKAAQTGHLVLSTLHTNDAPTTLTRMRNMGIAPFNIASSVILITAQRLARRLCPQCKQPADIPHENLLEAGYREEDIDGSWITYKPVGCPACNNGYKGRVGIYEVMPISEELQRIILQDGSALEIAAQARAEGVRSLRQSGLQKARMGFTSLEEVLAVTNE*