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SCNpilot_BF_INOC_scaffold_95_12

Organism: SCNpilot_BF_INOC_Burkholderiales_65_44

near complete RP 52 / 55 BSCG 51 / 51 ASCG 14 / 38
Location: comp(18497..20215)

Top 3 Functional Annotations

Value Algorithm Source
Sigma-54 factor interaction domain-containing protein n=2 Tax=Alicycliphilus denitrificans RepID=E8TUM5_ALIDB similarity UNIREF
DB: UNIREF100
  • Identity: 75.4
  • Coverage: 564.0
  • Bit_score: 838
  • Evalue 3.50e-240
Fis family sigma-54 specific transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 75.4
  • Coverage: 564.0
  • Bit_score: 838
  • Evalue 9.80e-241
Sigma54 specific transcriptional regulator, Fis family {ECO:0000313|EMBL:AEB82697.1}; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilu similarity UNIPROT
DB: UniProtKB
  • Identity: 75.4
  • Coverage: 564.0
  • Bit_score: 838
  • Evalue 4.90e-240

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Taxonomy

Alicycliphilus denitrificans → Alicycliphilus → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1719
ATGATTCTTATCGATAAAATCGTGGCTGAATCCGTCCTCACCATGCCGTCCGACGCCGACCTGCGCCGTCAGGTGCGGTTTTCCTCGGCCGACGGGCGCATCTGGCTCGCCGGCCAGCGCATGGTGCTGATGCACGCCGCGTCGCTGGGCACACTGCGCCGGGAACTGGTGCAGGCGGTGGGCATGGCAAGCGCACGGCGCCTGCTGATGCGCGCGGGCTACGCCGCAGGGGAGCGCGACGCGGCGCTGGCACGGCAATTGCGGGCCAGCGATGACGTTTTCTCGATGTTTTCGGTGGGCCCGCAATTGCACATGCTCGAAGGCTCCGTTCAGGTCACGCCCGAACTCCTCGATCTGGATGTCGGCCAGGGGCGCTTTCACGGCATCTTCCGCTGGGACCATTCATGGGAAGTGGAAGCGCACCTGCGCGACTTCGGACCGCAGAAAGACCCCGTGTGCTGGATGCTGCTGGGCTACGCCTCGGGCTACACCAGCGCCTTCATGGGCCGCCCCGTGCTCTACAAGGAAGTGGCGTGCGTGGGCAGTGGCCACGCGCACTGCCGCATCGAGGGCTGGCCCGTGGCCGACTGGCCCGGCGGCGAAGGCGAGGAACTGGCGCGCGACTATGTCGCCGACGCCCTGCCACCCAGCGAAGGCAGCCCCGAGGTCACCGCCTGGTTCAGCCGCATGCCGGCCGACGACGTACCGGAGACCCCGGTGGATGCGCTCGGGCCGCTGGTCGGCCGCTCGCCGGGCTTCACCGCCGCCACCGAATTGCTGCGCAAGGCTGCCGGCACGCAGGTGACCGTGCTGCTCACCGGCGAGACCGGCACCGGCAAGGAACGCTTCGCACGCGCGCTGCATGCGCTCGGCCCGCGCGCGGCCAAACCCTTCGTGGCGGTGAACTGCGCGGCGCTGCCGGGCGAACTGGTCGAATCCGAGCTCTTCGGCACCGAAAAAGGCGCCTACACGGGGGCCGACGCCGCGCGTCCCGGGCGCTTCGAGCGCGCCAGCGGCGGCACGCTCTTTCTTGACGAACTCGGGGAACTGCCGCTGCCCGCGCAGGCCAAGCTGCTGCGCGTGCTGCAGGACGGCCAGGTCGAGCGCCTGGGTGCCTCGCAGCCGCGCCAGGTGGACGTGCGCCTGGTGGCGGCCACGCATGTCGATCTGCTCGAAGCCGTGCGCGCCGGGCGCTTTCGCGAAGATCTGTACTACCGCATCAACGTCTACCCCATCCGCATCCCGCCGCTGCGCGAGCGCACGCAGGATATCGAAGTCTTCGCCCGGCACCTGCTGCAACGCTTTTGCAGCAAGCACGACAAGCACGTGAGCGGCTTCACCGACGAGGCGCTGCTGGCGCTGCGCGAACACGCCTGGCCCGGCAATGTGCGCGAGATGGAGAACCTCATCGAGCGCGGCGTGATCCTCGCGGGCGTGGGTCAACTCATCGAGGCGCGCCATCTCTTCGCGCAACCCGCCGACGGTGCCAGCCACACGCTGGAAGATTCCGGGCGTCTGCGCAGCAACGACACCCAGGTGGTGGAGGGCAAGCTGCTGGACCAGCTGCTGAACCGGCGCATCGGGCTGCAGCGGCTCGAACGCGAGCTGATCGAAGAAGCCGTCGCTCGCAACAAGGGCAATCTCGCCGCCGCCGCGCGGCTGCTGGGCCTGACGCGACCGCAACTGAGCTACCGCCTCGCCAAAATCCGAGAAAGCTGA
PROTEIN sequence
Length: 573
MILIDKIVAESVLTMPSDADLRRQVRFSSADGRIWLAGQRMVLMHAASLGTLRRELVQAVGMASARRLLMRAGYAAGERDAALARQLRASDDVFSMFSVGPQLHMLEGSVQVTPELLDLDVGQGRFHGIFRWDHSWEVEAHLRDFGPQKDPVCWMLLGYASGYTSAFMGRPVLYKEVACVGSGHAHCRIEGWPVADWPGGEGEELARDYVADALPPSEGSPEVTAWFSRMPADDVPETPVDALGPLVGRSPGFTAATELLRKAAGTQVTVLLTGETGTGKERFARALHALGPRAAKPFVAVNCAALPGELVESELFGTEKGAYTGADAARPGRFERASGGTLFLDELGELPLPAQAKLLRVLQDGQVERLGASQPRQVDVRLVAATHVDLLEAVRAGRFREDLYYRINVYPIRIPPLRERTQDIEVFARHLLQRFCSKHDKHVSGFTDEALLALREHAWPGNVREMENLIERGVILAGVGQLIEARHLFAQPADGASHTLEDSGRLRSNDTQVVEGKLLDQLLNRRIGLQRLERELIEEAVARNKGNLAAAARLLGLTRPQLSYRLAKIRES*