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SCNpilot_BF_INOC_scaffold_244_99

Organism: SCNpilot_BF_INOC_Flavobacteriia_40_10

near complete RP 52 / 55 MC: 2 BSCG 50 / 51 ASCG 13 / 38 MC: 1
Location: 84862..85857

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; Short=RNAP subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00059};; RNA polymerase similarity UNIPROT
DB: UniProtKB
  • Identity: 94.6
  • Coverage: 331.0
  • Bit_score: 613
  • Evalue 1.50e-172
DNA-directed RNA polymerase alpha subunit (EC:2.7.7.6) similarity KEGG
DB: KEGG
  • Identity: 94.3
  • Coverage: 331.0
  • Bit_score: 610
  • Evalue 3.30e-172
DNA-directed RNA polymerase subunit alpha n=1 Tax=Flavobacteriaceae bacterium (strain 3519-10) RepID=C6X1X4_FLAB3 similarity UNIREF
DB: UNIREF100
  • Identity: 94.3
  • Coverage: 331.0
  • Bit_score: 610
  • Evalue 1.20e-171

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Taxonomy

Chryseobacterium jeonii → Chryseobacterium → Flavobacteriales → Flavobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 996
ATGGCAATTTTAACATTTATTAAACCCGATAAGGTAATCCTTCTCAATTCTGATGATTTCAAAGGTAAATTTGAATTCAGACCATTAGAACCAGGATTTGGATTAACAATCGGTAATGCTTTGAGAAGAGTTTTGCTTTCTTCTCTGGAAGGATATGCTATCTCATCTATCAAAATAGAAGGCGTAGAGCACGAATTTTCAACTATTCCGGGCGTAATCGAAGATGTGACAGAAGTTATTCTGAACCTTAAACAATTACGACTAAAAGCTAAAACCGAAAATGCAACAGCAGAAACAGTAGTAGCTAAAGTATCCGGACAAACTGTCGTTACTGCAGGTGATTTAGGAAAATCAATCTCCGGATTCGAAGTATTGAATCCAGACTTGGTGATCTGCACCCTGAACAAAAGCGTTAAGTTTGAAATTACTTTCAATATTGAAAAAGGAAGAGGTTATGTTCCATCAGAACAAAACAAATCGAACAATGCTCCTATAGGTACCATTGCCATCGACTCTATCTTTACACCAATCAAGAAAGTACAATATGCTGTTGAGAATTACCGTGTAGAGCAAAAAACAGACTATGAAAAATTGGTATTGGATATTGAGACCGATGGATCAATCAGTCCTCAGAATGCTTTAACAGAAGCATCTAAGATATTGATCTATCACTTCATGCTTTTCTCTGACGAAAGAATTACGTTAGAAACAGAAGCCGTGAAAGCGTCCATCCAATACGATGAAGAAACTTTACACACCCGTCAGCTTTTGAAGTCTAAACTTACCGATATGGATTTATCTGTAAGAGCACTTAACTGCCTGAAAGCAGCGGAAGTGGAAACACTGGGTGAACTGGTTTCTTACACCAAGTCTGATTTGATGAAATTCAGAAATTTCGGTAAAAAATCTTTAACAGAATTAGAAGAATTAGTGCATGCAAAAGGTCTTAACTTCGGTTTCGACGTTGCAAAATATAAATTAGACGCTGATAAATAA
PROTEIN sequence
Length: 332
MAILTFIKPDKVILLNSDDFKGKFEFRPLEPGFGLTIGNALRRVLLSSLEGYAISSIKIEGVEHEFSTIPGVIEDVTEVILNLKQLRLKAKTENATAETVVAKVSGQTVVTAGDLGKSISGFEVLNPDLVICTLNKSVKFEITFNIEKGRGYVPSEQNKSNNAPIGTIAIDSIFTPIKKVQYAVENYRVEQKTDYEKLVLDIETDGSISPQNALTEASKILIYHFMLFSDERITLETEAVKASIQYDEETLHTRQLLKSKLTDMDLSVRALNCLKAAEVETLGELVSYTKSDLMKFRNFGKKSLTELEELVHAKGLNFGFDVAKYKLDADK*