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SCNpilot_BF_INOC_scaffold_438_17

Organism: SCNpilot_BF_INOC_Flavobacteriia_40_10

near complete RP 52 / 55 MC: 2 BSCG 50 / 51 ASCG 13 / 38 MC: 1
Location: 16945..17223

Top 3 Functional Annotations

Value Algorithm Source
30S ribosomal protein S20 n=1 Tax=Chryseobacterium sp. CF314 RepID=J2K7I6_9FLAO similarity UNIREF
DB: UNIREF100
  • Identity: 88.0
  • Coverage: 92.0
  • Bit_score: 160
  • Evalue 1.20e-36
30S ribosomal protein S20 {ECO:0000256|HAMAP-Rule:MF_00500}; TaxID=1144316 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobac similarity UNIPROT
DB: UniProtKB
  • Identity: 87.0
  • Coverage: 92.0
  • Bit_score: 158
  • Evalue 3.60e-36
SSU ribosomal protein S20p similarity KEGG
DB: KEGG
  • Identity: 92.9
  • Coverage: 84.0
  • Bit_score: 154
  • Evalue 1.40e-35

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Taxonomy

Chryseobacterium sp. CF314 → Chryseobacterium → Flavobacteriales → Flavobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 279
TTGCACCCACATTTAGGAAACGATATGGCAAATCATAAATCAGCGCTGAAAAGAATCAGACAAAACGCAACAAAAAGACTTAGAAACCGATACTATCATAAAACCGCAAGAACTGCAGTAAAAGTATTGAGAACTGAAGAAGATAAGAAAGCGGCTACAGAGCAGCTTCCAAAAGTGATCTCTTTGTTGGACAAATTGGTGAAGAAAAACATCATTCACAAAAACAAAGCTGCTAATTTAAAAAGCAAATTAACTAAGCACGTTAATAAACTGGCTTAA
PROTEIN sequence
Length: 93
LHPHLGNDMANHKSALKRIRQNATKRLRNRYYHKTARTAVKVLRTEEDKKAATEQLPKVISLLDKLVKKNIIHKNKAANLKSKLTKHVNKLA*