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SCNpilot_BF_INOC_scaffold_480_44

Organism: SCNpilot_BF_INOC_Flavobacteriia_40_10

near complete RP 52 / 55 MC: 2 BSCG 50 / 51 ASCG 13 / 38 MC: 1
Location: 44969..45463

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase ECF-type sigma factor n=1 Tax=Flavobacteriaceae bacterium (strain 3519-10) RepID=C6X1F6_FLAB3 similarity UNIREF
DB: UNIREF100
  • Identity: 84.8
  • Coverage: 164.0
  • Bit_score: 285
  • Evalue 3.30e-74
RNA polymerase sigma70 factor {ECO:0000313|EMBL:KEY18868.1}; TaxID=266748 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobact similarity UNIPROT
DB: UniProtKB
  • Identity: 89.0
  • Coverage: 164.0
  • Bit_score: 294
  • Evalue 1.30e-76
RNA polymerase ECF-type sigma factor similarity KEGG
DB: KEGG
  • Identity: 85.4
  • Coverage: 164.0
  • Bit_score: 286
  • Evalue 5.40e-75

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Taxonomy

Chryseobacterium antarcticum → Chryseobacterium → Flavobacteriales → Flavobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 495
TTGAACAACAGAGAAAAGGAATTTGCGAAACTTATAAAAGATAATCAGGGACTGATCATCAAGGTGTCTCGTCTTTATACCAATTCGCTGGAAGATGAGGAAGACTTGTTTCAGGAAATTGTGCTGCAGCTTTGGCGATCGTATGATTCCTTCAAAGGACAGTCGAAAATTTCGACATGGATGTACAGGGTAGCGCTTAACACAGCTATTACGCTATTCCGAAAGAAAACCAAAATGCCAGTCACGGACGAACTGACCGATTTTCATTACAAAGATTTTTTGGAAGACGACCAAGAAAAGCAGCAACAGATTTCTACGCTTTACAGAGTCATCAAAATGCTTCCCAATGTGGAAAGAGCGATTGTGACAATGTATCTTGACGATTTACCTTATCGTGACATCGCCGAAAATTTGGGGATTACCGAGGTAAACGCCCGTGTGAAAATGAACCGACTGAAGAAAACCCTAAAAGAACTAATGCAAAAACATGCCTGA
PROTEIN sequence
Length: 165
LNNREKEFAKLIKDNQGLIIKVSRLYTNSLEDEEDLFQEIVLQLWRSYDSFKGQSKISTWMYRVALNTAITLFRKKTKMPVTDELTDFHYKDFLEDDQEKQQQISTLYRVIKMLPNVERAIVTMYLDDLPYRDIAENLGITEVNARVKMNRLKKTLKELMQKHA*