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SCNpilot_BF_INOC_scaffold_61_34

Organism: SCNpilot_BF_INOC_Flavobacteriia_40_10

near complete RP 52 / 55 MC: 2 BSCG 50 / 51 ASCG 13 / 38 MC: 1
Location: 37090..37572

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase ECF-type sigma factor n=1 Tax=Flavobacteriaceae bacterium (strain 3519-10) RepID=C6X2N8_FLAB3 similarity UNIREF
DB: UNIREF100
  • Identity: 67.1
  • Coverage: 158.0
  • Bit_score: 217
  • Evalue 8.10e-54
RNA polymerase subunit sigma-24 {ECO:0000313|EMBL:KIA84356.1}; TaxID=510955 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseoba similarity UNIPROT
DB: UniProtKB
  • Identity: 66.5
  • Coverage: 161.0
  • Bit_score: 220
  • Evalue 2.30e-54
RNA polymerase ECF-type sigma factor similarity KEGG
DB: KEGG
  • Identity: 67.1
  • Coverage: 158.0
  • Bit_score: 217
  • Evalue 2.30e-54

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Taxonomy

Chryseobacterium solincola → Chryseobacterium → Flavobacteriales → Flavobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 483
ATGAAAACCGAGTTTAAAGAAATATACAAGGATCTTTCACCAAAGATTTACAAACTGTGTTTAAGTTACTGTGCAGATCGGGCTTTGGCAGACGATCTTCATCAGGAAACGTGGATTGCAGTTTGGGAAAGTTTACCCAAGTTTCGCCACGAAAGCCAATTAAGTACCTGGATCTACCGAATTGCGATTAACACTTGCCTTACCGGCATGAAAAAACACAAAGACAAAAACCTGAACTCCGAAAAAATACTATCGAAAATTGTGGCGGACGAGAGCTTTGACGAGCATCAAATGACGATTCTTCAGCAGAGCATTGCCCAACTAAGAGAAGCCGACCGCATCATCATTACACTGGTTCTGGAGGAAAAGCCCTACACAGAAATTGCAGAAATTACCGGTATTACCGAAAATAATTTGCGCGTGAAAATTCACCGAATAAAAAGAGAACTCTCAGAAATATATAAAAAATATGAAAACCTTTGA
PROTEIN sequence
Length: 161
MKTEFKEIYKDLSPKIYKLCLSYCADRALADDLHQETWIAVWESLPKFRHESQLSTWIYRIAINTCLTGMKKHKDKNLNSEKILSKIVADESFDEHQMTILQQSIAQLREADRIIITLVLEEKPYTEIAEITGITENNLRVKIHRIKRELSEIYKKYENL*