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SCNpilot_BF_INOC_scaffold_61_216

Organism: SCNpilot_BF_INOC_Flavobacteriia_40_10

near complete RP 52 / 55 MC: 2 BSCG 50 / 51 ASCG 13 / 38 MC: 1
Location: comp(235190..236965)

Top 3 Functional Annotations

Value Algorithm Source
Transcription termination factor Rho {ECO:0000256|HAMAP-Rule:MF_01884}; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_01884};; ATP-dependent helicase Rho {ECO:0000256|HAMAP-Rule:MF_01884}; TaxID=510955 specie similarity UNIPROT
DB: UniProtKB
  • Identity: 78.4
  • Coverage: 607.0
  • Bit_score: 899
  • Evalue 1.80e-258
Transcription termination factor Rho n=1 Tax=Chryseobacterium gleum ATCC 35910 RepID=D7VVL3_9FLAO similarity UNIREF
DB: UNIREF100
  • Identity: 73.3
  • Coverage: 610.0
  • Bit_score: 842
  • Evalue 3.20e-241
rho; transcription termination factor Rho similarity KEGG
DB: KEGG
  • Identity: 73.3
  • Coverage: 611.0
  • Bit_score: 834
  • Evalue 1.90e-239

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Taxonomy

Chryseobacterium solincola → Chryseobacterium → Flavobacteriales → Flavobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 1776
ATGTTCAATATCGAAACGTTAAGGTCGAAATCTCCCGAAGATTTGACTAAAATTACGAAAGATTTAGGCGTTAAACTTGTTAGAAATAGCTCCGACAACGATAAAATCTTTGCCATCCTCGATTTTCAAGCATCGAACACGCAAGCCGCAAAAGATTATTTCAACGCTACAGAAATCTCCGTGAATTCAGAACAAAAGTCCACTTCCGACCAACCGGCTCCCACACCCAAAAAGCGTGGCCCCAAAAAGAAAACACCAGCACCTGTAGAAAGTTCAGGGGAAATTCCTGCGGAAACAACGGAAACTTCCACAATTAGCAAGGATACCGCAGAAGTGGAGAAAGCGGAAGAACTTCAGGAAAAACCTGCGGTCGCATCCACTAAGAAAAAAAGGCAGCGAATTGCGACCGATCAACCCGCTGAGAAAGTGGCAGAAACTACTACAGAAACTGTAGAACCGCAAAAAGAAACCGAAACTCCTGAGGTGAGTCGCCCGGTGCATCACCAAAATGGTAACGGAAACGGAAATCAGAATGGCAACGGAAATCAGAATCAGAACCAGAACCGCAACCATCAGAATAAGAACCAGAATAAAAATCAGAACCAGAATAAGAATCAAAATGCAGAAGCTCCAGAGGAGCACGCTAAAAAAGAATACAACTTTGATGGTTTGGTAACCATAGAAGGTGTGCTGGAAATTCTTCCCGATAATTACGGATTCCTTCGCTCATCAGATTTTTCCTATATTTCATCACCCGATGATGTATATGTATCTACCAACCAGATTCGAAATTATGGACTGAAAACCGGTGATACCGTAAGAGGAATCGTTCGTTTGCCTAAAGAAGGCGAGAAGTATTTTTCTCTCCTGAAACCCACGGAAGTGAACGGCCGCGATTTGGAATTTATCAAAGACCGCGTGGCATTCGAGTTCTTAACACCCCTTTTCCCCGAAGAAAAATTTAACCTTACCGGAAGAGGTTCAACACTTTCTACAAGAATTGTAGATTTGTTTACCCCGATTGGTAAAGGCCAGCGTGCGATGATCGTGGCACAACCTAAAACAGGTAAAACCATGCTGCTGAAAGATATTGCCAACTCTATTTCTGCCAATCATCCGGAAGCTTATATGATGATTTTGCTGATAGATGAAAGACCGGAAGAGGTGACAGATATGGAAAGAAGTGTGAATGCAGAGGTAATTGCTTCCACTTTTGACGAACCTGCTGAAAAACATGTGAAGGTGGCCAATCTTGTTCTTTCTAAAGCGCAAAGAATGGTGGAATGCGGACACGATGTGGTTATCTTGCTCGATTCTATCACACGTTTGGCGAGAGCATACAACACAGTGACGCCAGCTTCCGGAAAAATTTTGTCGGGAGGTGTGGACGCCAATGCGCTGCACAAACCGAAAAGATTTTTTGGTGCTGCCAGAAATATTGAGGGCGGTGGTTCTTTAACTATTGTTGCAACAGCGCTGATCGATACAGGTTCCAAAATGGATGAGGTGATTTTTGAGGAATTTAAAGGAACCGGAAATATGGAACTTCAACTGGATCGAAAAATTGCCAACAAGAGAATTTATCCCGCCATAGATTTGGTGGCATCCAGCACCAGAAGAGACGATTTGCTTTTGGATGAAACCACGCAGCAAAGAATGTGGATACTGAGGAAATATCTTGCCGATATGAATCCGGTGGAAGCCATGGAGTTTGTCAATAAAAGCATCAAAGGAACCATCAATAATGAGGAATTTTTGATGTCTATGAACAGATAA
PROTEIN sequence
Length: 592
MFNIETLRSKSPEDLTKITKDLGVKLVRNSSDNDKIFAILDFQASNTQAAKDYFNATEISVNSEQKSTSDQPAPTPKKRGPKKKTPAPVESSGEIPAETTETSTISKDTAEVEKAEELQEKPAVASTKKKRQRIATDQPAEKVAETTTETVEPQKETETPEVSRPVHHQNGNGNGNQNGNGNQNQNQNRNHQNKNQNKNQNQNKNQNAEAPEEHAKKEYNFDGLVTIEGVLEILPDNYGFLRSSDFSYISSPDDVYVSTNQIRNYGLKTGDTVRGIVRLPKEGEKYFSLLKPTEVNGRDLEFIKDRVAFEFLTPLFPEEKFNLTGRGSTLSTRIVDLFTPIGKGQRAMIVAQPKTGKTMLLKDIANSISANHPEAYMMILLIDERPEEVTDMERSVNAEVIASTFDEPAEKHVKVANLVLSKAQRMVECGHDVVILLDSITRLARAYNTVTPASGKILSGGVDANALHKPKRFFGAARNIEGGGSLTIVATALIDTGSKMDEVIFEEFKGTGNMELQLDRKIANKRIYPAIDLVASSTRRDDLLLDETTQQRMWILRKYLADMNPVEAMEFVNKSIKGTINNEEFLMSMNR*