ggKbase home page

SCNpilot_BF_INOC_scaffold_106

Search features with annotation key words

Displaying items 61-90 of 126 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_BF_INOC_scaffold_106_61
Hylemonella gracilis, Hylemonella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(73649..73846)
DNA (198bp) protein (66aa)
Putative uncharacterized protein n=1 Tax=Hylemonella gracilis ATCC 19624 RepID=F3KVJ6_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EGI76179.1}; TaxID=887062 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hylemonella.;" source="Hylemonella gracilis
hypothetical protein
SCNpilot_BF_INOC_scaffold_106_62
Pseudomonas sp. MRSN12121, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(74172..74717)
DNA (546bp) protein (182aa)
Uncharacterized protein n=1 Tax=Thiocystis violascens (strain ATCC 17096 / DSM 198 / 6111) RepID=I3Y8D8_THIV6
hypothetical protein
Plasmid, complete sequence {ECO:0000313|EMBL:AJO81916.1}; TaxID=1611770 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp
SCNpilot_BF_INOC_scaffold_106_63
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

74860..75153
DNA (294bp) protein (98aa)
Transposase n=2 Tax=Rhodanobacter denitrificans RepID=M4NHM5_9GAMM
transposase
Transposase {ECO:0000313|EMBL:AGG90950.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanoba
SCNpilot_BF_INOC_scaffold_106_64
Arenimonas metalli, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(75477..75836)
DNA (360bp) protein (120aa)
hypothetical protein n=1 Tax=Acidovorax radicis RepID=UPI0002376988
Uncharacterized protein {ECO:0000313|EMBL:KFN46153.1}; TaxID=1384056 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Arenimonas.;" source="Arenimonas metalli
hypothetical protein
SCNpilot_BF_INOC_scaffold_106_65
Stenotrophomonas rhizophila, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(75937..76734)
DNA (798bp) protein (266aa)
Uncharacterized protein n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U2YC06_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:AHY57288.1}; TaxID=216778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomo
hypothetical protein
SCNpilot_BF_INOC_scaffold_106_66
unknown

Not on your lists

comp(76829..77185)
DNA (357bp) protein (119aa)

This feature has no annotations

SCNpilot_BF_INOC_scaffold_106_67
R_Gammaproteobacteria_63_22, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

77596..78021
DNA (426bp) protein (142aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI00036FCD9B
class I peptide chain release factor; K15034 ribosome-associated protein Tax=RIFCSPHIGHO2_12_FULL_Gammaproteobacteria_63_22_curated
hypothetical protein
SCNpilot_BF_INOC_scaffold_106_68
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

78018..78614
DNA (597bp) protein (199aa)
Phospholipid/glycerol acyltransferase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W785_9GAMM
Phospholipid/glycerol acyltransferase {ECO:0000313|EMBL:EIL95326.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="R
1-acyl-sn-glycerol-3-phosphate acyltransferase
SCNpilot_BF_INOC_scaffold_106_69
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

79011..79469
DNA (459bp) protein (153aa)
3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase {ECO:0000256|HAMAP-Rule:MF_00405, ECO:0000256|SAAS:SAAS00064161}; EC=4.2.1.59 {ECO:0000256|HAMAP-Rule:MF_00405, ECO:0000256|SAAS:SAAS00064166};; 3-
beta-hydroxyacyl-(acyl carrier protein) dehydratase FabA (EC:4.2.1.59)
3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VUU1_9GAMM
SCNpilot_BF_INOC_scaffold_106_70
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

79471..80679
DNA (1209bp) protein (403aa)
3-oxoacyl-(acyl-carrier-protein) synthase (EC:2.3.1.41)
3-oxoacyl-(Acyl-carrier-protein) synthase {ECO:0000313|EMBL:AGG89989.1}; EC=2.3.1.41 {ECO:0000313|EMBL:AGG89989.1};; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacte
Beta-ketoacyl-[ACP] synthase I n=1 Tax=Rhodanobacter denitrificans RepID=I4WYI9_9GAMM
SCNpilot_BF_INOC_scaffold_106_71
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(80824..81639)
DNA (816bp) protein (272aa)
Transcriptional regulator {ECO:0000313|EMBL:GAN45813.1}; TaxID=1475481 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugakiibacter.;" source="Mizugakiiba
Transcriptional regulator, Crp/Fnr family id=2992328 bin=GWF1_Xanthomonadales_69_6 species=Pseudoxanthomonas suwonensis genus=Pseudoxanthomonas taxon_order=Xanthomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWF1_Xanthomonadales_69_6 organism_group=Gammaproteobacteria
cAMP-binding protein
SCNpilot_BF_INOC_scaffold_106_72
R_Gammaproteobacteria_63_22, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(81759..82343)
DNA (585bp) protein (195aa)
SCO1/SenC family protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WMF1_9GAMM
uncharacterized protein SCO1/SenC/PrrC, involved in biogenesis of respiratory and photosynthetic systems Tax=RIFCSPHIGHO2_12_FULL_Gammaproteobacteria_63_22_curated
uncharacterized protein SCO1/SenC/PrrC, involved in biogenesis of respiratory and photosynthetic systems
SCNpilot_BF_INOC_scaffold_106_73
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(82340..83128)
DNA (789bp) protein (263aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W1Q2_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL93393.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter s
hypothetical protein
SCNpilot_BF_INOC_scaffold_106_74
Arenimonas oryziterrae, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(83134..84645)
DNA (1512bp) protein (504aa)
nitrite reductase (EC:1.7.2.1)
membrane protein n=1 Tax=Arenimonas oryziterrae RepID=UPI0003B44F59
Uncharacterized protein {ECO:0000313|EMBL:KFN45003.1}; TaxID=1121015 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Arenimonas.;" source="Arenimonas oryzite
SCNpilot_BF_INOC_scaffold_106_75
Salinisphaera shabanensis, Salinisphaera, Salinisphaerales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

84854..86278
DNA (1425bp) protein (475aa)
Cytochrome c oxidase cbb3-type subunit I protein {ECO:0000313|EMBL:ERJ18250.1}; EC=1.9.3.1 {ECO:0000313|EMBL:ERJ18250.1};; TaxID=1033802 species="Bacteria; Proteobacteria; Gammaproteobacteria; Salinis
cytochrome oxidase subunit I n=1 Tax=Rudaea cellulosilytica RepID=UPI0003651B4E
cbb3-type cytochrome c oxidase subunit I
SCNpilot_BF_INOC_scaffold_106_76
R_Gammaproteobacteria_63_22, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

86290..86913
DNA (624bp) protein (208aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI000374A524
cbb3-type cytochrome c oxidase subunit II; K00405 cytochrome c oxidase cbb3-type subunit II Tax=RIFCSPHIGHO2_12_FULL_Gammaproteobacteria_63_22_curated
cbb3-type cytochrome c oxidase subunit II
SCNpilot_BF_INOC_scaffold_106_77
Pseudoxanthomonas suwonensis, Pseudoxanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

86910..87062
DNA (153bp) protein (51aa)
Putative uncharacterized protein {ECO:0000313|EMBL:ADV26202.1}; TaxID=743721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Pseudoxanthomonas.;" source="Pse
SCNpilot_BF_INOC_scaffold_106_78
Oleiagrimonas soli, Oleiagrimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

87059..88000
DNA (942bp) protein (314aa)
ccoP; Cytochrome C oxidase cbb3-type, di-heme subunit III (EC:1.9.3.1)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI00037AAF7D
Cbb3-type cytochrome c oxidase subunit {ECO:0000256|PIRNR:PIRNR000006}; TaxID=1543381 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Oleiagrimonas.;" source
SCNpilot_BF_INOC_scaffold_106_79
Oleiagrimonas soli, Oleiagrimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

87997..88314
DNA (318bp) protein (106aa)
membrane protein n=1 Tax=Arenimonas oryziterrae RepID=UPI0003B55059
Membrane protein {ECO:0000313|EMBL:KGI77865.1}; TaxID=1543381 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Oleiagrimonas.;" source="Oleiagrimonas soli.;"
hypothetical protein
SCNpilot_BF_INOC_scaffold_106_80
Lysobacter dokdonensis, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

88501..89973
DNA (1473bp) protein (491aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI000374C409
Type cbb3 cytochrome oxidase biogenesis protein CcoG {ECO:0000313|EMBL:KGQ20035.1}; TaxID=1300345 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.
cytochrome C oxidase accessory protein CcoG
SCNpilot_BF_INOC_scaffold_106_81
unknown

Not on your lists

89970..90215
DNA (246bp) protein (82aa)

This feature has no annotations

SCNpilot_BF_INOC_scaffold_106_82
Oleiagrimonas soli, Oleiagrimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

90212..92638
DNA (2427bp) protein (809aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI00037A11AA
Uncharacterized protein {ECO:0000313|EMBL:KGI78378.1}; TaxID=1543381 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Oleiagrimonas.;" source="Oleiagrimonas s
heavy metal translocating P-type ATPase
SCNpilot_BF_INOC_scaffold_106_83
Oleiagrimonas soli, Oleiagrimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

92635..92802
DNA (168bp) protein (56aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI00035D0084
Cytochrome oxidase maturation protein Cbb3 {ECO:0000313|EMBL:KGI77864.1}; TaxID=1543381 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Oleiagrimonas.;" sour
cytochrome oxidase maturation protein, cbb3-type
SCNpilot_BF_INOC_scaffold_106_84
Oleiagrimonas soli, Oleiagrimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

92799..93527
DNA (729bp) protein (243aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI00036807B5
Uncharacterized protein {ECO:0000313|EMBL:KGI77863.1}; TaxID=1543381 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Oleiagrimonas.;" source="Oleiagrimonas s
membrane protein
SCNpilot_BF_INOC_scaffold_106_85
Oleiagrimonas soli, Oleiagrimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(93543..94289)
DNA (747bp) protein (249aa)
Crp/Fnr family transcriptional regulator n=1 Tax=Rhodanobacter denitrificans RepID=I4WYM5_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:KGI78377.1}; TaxID=1543381 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Oleiagrimonas.;" source="Oleiagrimonas s
cAMP-binding protein
SCNpilot_BF_INOC_scaffold_106_86
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(94390..95838)
DNA (1449bp) protein (483aa)
Coproporphyrinogen-III oxidase {ECO:0000256|PIRNR:PIRNR000167}; EC=1.3.99.22 {ECO:0000256|PIRNR:PIRNR000167};; TaxID=1475481 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xa
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI00037F00EB
oxygen-independent coproporphyrinogen III oxidase
SCNpilot_BF_INOC_scaffold_106_87
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(96013..96561)
DNA (549bp) protein (183aa)
Sortase-like acyltransferase n=1 Tax=Rhodanobacter denitrificans RepID=M4NGD1_9GAMM
sortase-like acyltransferase
Sortase-like acyltransferase {ECO:0000313|EMBL:AGG89954.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobact
SCNpilot_BF_INOC_scaffold_106_88
Janthinobacterium lividum, Janthinobacterium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

96833..98269
DNA (1437bp) protein (479aa)
Putative phosphate acetyltransferase {ECO:0000313|EMBL:EZP41657.1}; EC=2.3.1.8 {ECO:0000313|EMBL:EZP41657.1};; TaxID=29581 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalo
phosphate acetyltransferase (EC:2.3.1.8)
bifunctional enoyl-CoA hydratase/phosphate acetyltransferase n=1 Tax=Dyella ginsengisoli RepID=UPI00034BD966
SCNpilot_BF_INOC_scaffold_106_89
Ralstonia sp. AU12-08, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

98266..99459
DNA (1194bp) protein (398aa)
Acetate kinase {ECO:0000256|HAMAP-Rule:MF_00020}; EC=2.7.2.1 {ECO:0000256|HAMAP-Rule:MF_00020};; Acetokinase {ECO:0000256|HAMAP-Rule:MF_00020}; TaxID=1235457 species="Bacteria; Proteobacteria; Betapro
acetate kinase (EC:2.7.2.1)
Acetate kinase n=1 Tax=Ralstonia sp. AU12-08 RepID=S9S3L9_9RALS
SCNpilot_BF_INOC_scaffold_106_90
Bradyrhizobium sp. STM 3843, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

99499..101121
DNA (1623bp) protein (541aa)
Putative FAD binding dehydrogenase {ECO:0000313|EMBL:CCE11172.1}; EC=1.3.99.1 {ECO:0000313|EMBL:CCE11172.1};; TaxID=551947 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhi
Putative FAD binding dehydrogenase n=1 Tax=Bradyrhizobium sp. STM 3843 RepID=H0TXI4_9BRAD
hypothetical protein
Displaying items 61-90 of 126 in total

View Taxonomy