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SCNpilot_BF_INOC_scaffold_156

Search features with annotation key words

Displaying items 31-60 of 94 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_BF_INOC_scaffold_156_31
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(35953..38829)
DNA (2877bp) protein (959aa)
TonB-dependent outer membrane receptor protein n=1 Tax=Xanthomonas translucens DAR61454 RepID=L7HEC4_XANCT
TonB-dependent receptor {ECO:0000313|EMBL:GAN45632.1}; TaxID=1475481 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugakiibacter.;" source="Mizugakiibact
TonB-dependent receptor
SCNpilot_BF_INOC_scaffold_156_32
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(39267..40409)
DNA (1143bp) protein (381aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WSU7_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:GAN45633.1}; TaxID=1475481 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugakiibacter.;" source="Mizugakiibact
hypothetical protein
SCNpilot_BF_INOC_scaffold_156_33
Oleiagrimonas soli, Oleiagrimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(40636..41526)
DNA (891bp) protein (297aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI000370F77D
33 kDa chaperonin {ECO:0000256|SAAS:SAAS00038673}; TaxID=1543381 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Oleiagrimonas.;" source="Oleiagrimonas soli.
heat shock protein Hsp33
SCNpilot_BF_INOC_scaffold_156_34
RBG_13_OP8X_37_8_curated, OP8X, Bacteria

Not on your lists

41880..45434
DNA (3555bp) protein (1185aa)
Peptidase S8/S53 subtilisin kexin sedolisin (Fragment) n=1 Tax=uncultured bacterium RepID=K1XUS9_9BACT
peptidase S8/S53 subtilisin kexin sedolisin Tax=RBG_13_OP8X_37_8_curated
peptidase S8/S53 subtilisin kexin sedolisin
SCNpilot_BF_INOC_scaffold_156_35
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

45603..46259
DNA (657bp) protein (219aa)
Monofunctional biosynthetic peptidoglycan transglycosylase {ECO:0000256|HAMAP-Rule:MF_00766, ECO:0000256|SAAS:SAAS00055690}; Short=Monofunctional TGase {ECO:0000256|HAMAP-Rule:MF_00766};; EC=2.4.2.- {
Monofunctional biosynthetic peptidoglycan transglycosylase n=1 Tax=Rhodanobacter denitrificans RepID=U3GKL7_9GAMM
monofunctional biosynthetic peptidoglycan transglycosylase
SCNpilot_BF_INOC_scaffold_156_36
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(46294..47850)
DNA (1557bp) protein (519aa)
Amino acid/peptide transporter n=1 Tax=Rhodanobacter sp. 115 RepID=I4W8M5_9GAMM
Amino acid/peptide transporter {ECO:0000313|EMBL:EIL95816.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanob
amino acid/peptide transporter
SCNpilot_BF_INOC_scaffold_156_37
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

47994..48422
DNA (429bp) protein (143aa)
Signal transduction protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WG87_9GAMM
putative signal-transduction protein containing cAMP-binding and CBS domains Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
putative signal-transduction protein containing cAMP-binding and CBS domains
SCNpilot_BF_INOC_scaffold_156_38
Lysobacter defluvii, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(48427..49104)
DNA (678bp) protein (226aa)
maleylacetoacetate isomerase n=1 Tax=Arenimonas oryziterrae RepID=UPI0003B39A2F
Maleylacetoacetate isomerase {ECO:0000313|EMBL:KGO98014.1}; TaxID=1385515 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter de
maleylacetoacetate isomerase
SCNpilot_BF_INOC_scaffold_156_39
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(49170..50159)
DNA (990bp) protein (330aa)
Fumarylacetoacetate (FAA) hydrolase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VYU3_9GAMM
2-keto-4-pentenoate hydratase
2-keto-4-pentenoate hydratase {ECO:0000313|EMBL:AHX11959.1}; TaxID=1379159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella jiangning
SCNpilot_BF_INOC_scaffold_156_40
Arenimonas oryziterrae, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(50185..51483)
DNA (1299bp) protein (433aa)
Homogentisate 1,2-dioxygenase {ECO:0000256|HAMAP-Rule:MF_00334, ECO:0000256|SAAS:SAAS00015626}; Short=HGDO {ECO:0000256|HAMAP-Rule:MF_00334};; EC=1.13.11.5 {ECO:0000256|HAMAP-Rule:MF_00334, ECO:000025
homogentisate 1,2-dioxygenase (EC:1.13.11.5)
homogentisate 1,2-dioxygenase n=1 Tax=Rudaea cellulosilytica RepID=UPI00035E57E2
SCNpilot_BF_INOC_scaffold_156_41
RIFOXYA1_FULL_Xanthomonadales_69_10_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(51538..52635)
DNA (1098bp) protein (366aa)
4-hydroxyphenylpyruvate dioxygenase n=1 Tax=Dyella ginsengisoli RepID=UPI00034C2913
4-hydroxyphenylpyruvate dioxygenase Tax=RIFOXYA1_FULL_Xanthomonadales_69_10_curated
4-hydroxyphenylpyruvate dioxygenase
SCNpilot_BF_INOC_scaffold_156_42
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

52719..53174
DNA (456bp) protein (152aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI000374FFB8
MarR family transcriptional regulator {ECO:0000313|EMBL:EIL97753.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="R
transcriptional regulator
SCNpilot_BF_INOC_scaffold_156_43
GWF1_Xanthomonadales_69_6_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(53372..54880)
DNA (1509bp) protein (503aa)
Amino acid/peptide transporter id=2773053 bin=GWF1_Xanthomonadales_69_6 species=Pseudoxanthomonas suwonensis genus=Pseudoxanthomonas taxon_order=Xanthomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWF1_Xanthomonadales_69_6 organism_group=Gammaproteobacteria
amino acid/peptide transporter; K03305 proton-dependent oligopeptide transporter, POT family Tax=GWF1_Xanthomonadales_69_6_curated
amino acid/peptide transporter
SCNpilot_BF_INOC_scaffold_156_44
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(55007..55852)
DNA (846bp) protein (282aa)
Tryptophan 2,3-dioxygenase {ECO:0000256|HAMAP-Rule:MF_01972}; Short=TDO {ECO:0000256|HAMAP-Rule:MF_01972};; EC=1.13.11.11 {ECO:0000256|HAMAP-Rule:MF_01972};; Tryptamin 2,3-dioxygenase {ECO:0000256|HAM
Tryptophan 2,3-dioxygenase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VYV0_9GAMM
tryptophan 2,3-dioxygenase (vermilion)
SCNpilot_BF_INOC_scaffold_156_45
Arenimonas malthae, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

56185..57261
DNA (1077bp) protein (359aa)
ABC transporter permease n=1 Tax=Arenimonas oryziterrae RepID=UPI0003B3B080
Uncharacterized protein {ECO:0000313|EMBL:KFN42370.1}; TaxID=1384054 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Arenimonas.;" source="Arenimonas malthae
pyruvate dehydrogenase
SCNpilot_BF_INOC_scaffold_156_46
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

57351..58331
DNA (981bp) protein (327aa)
Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase component beta subunit n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WE71_9GAMM
2-oxoisovalerate dehydrogenase subunit beta {ECO:0000313|EMBL:GAN45698.1}; TaxID=1475481 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugakiibacter.;" s
2-oxoisovalerate dehydrogenase
SCNpilot_BF_INOC_scaffold_156_47
Lysobacter capsici, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

58349..59722
DNA (1374bp) protein (458aa)
dihydrolipoamide acyltransferase component of branched-chain alpha-keto acid dehydrogenase complex (EC:2.3.1.168)
Dihydrolipoamide acyltransferase component of branched-chain alpha-keto acid dehydrogenase complex n=1 Tax=Stenotrophomonas maltophilia D457 RepID=I0KTP7_STEMA
Branched-chain alpha-keto acid dehydrogenase subunit E2 {ECO:0000313|EMBL:EYR68450.1}; TaxID=1444315 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobact
SCNpilot_BF_INOC_scaffold_156_48
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(60281..61396)
DNA (1116bp) protein (372aa)
3,4-dihydroxy-2-butanone 4-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00180}; Short=DHBP synthase {ECO:0000256|HAMAP-Rule:MF_00180};; EC=4.1.99.12 {ECO:0000256|HAMAP-Rule:MF_00180};; TaxID=1475481
3,4-dihydroxy-2-butanone 4-phosphate synthase (EC:4.1.2.- 3.5.4.25)
3,4-dihydroxy-2-butanone 4-phosphate synthase n=1 Tax=Rhodanobacter sp. 115 RepID=I4VTP5_9GAMM
SCNpilot_BF_INOC_scaffold_156_49
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(61433..62044)
DNA (612bp) protein (204aa)
Riboflavin synthase subunit alpha n=1 Tax=Rhodanobacter sp. 115 RepID=I4VTP6_9GAMM
Riboflavin synthase subunit alpha {ECO:0000313|EMBL:EIL90587.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhoda
riboflavin synthase subunit alpha
SCNpilot_BF_INOC_scaffold_156_50
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(62045..63154)
DNA (1110bp) protein (370aa)
5-amino-6-(5-phosphoribosylamino)uracil reductase (EC:3.5.4.26 1.1.1.193) Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
5-amino-6-(5-phosphoribosylamino)uracil reductase (EC:3.5.4.26 1.1.1.193)
Riboflavin biosynthesis protein RibD n=1 Tax=Rhodanobacter sp. 115 RepID=I4VTP7_9GAMM
SCNpilot_BF_INOC_scaffold_156_51
Arenimonas donghaensis, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(63184..63702)
DNA (519bp) protein (173aa)
Transcriptional repressor NrdR n=1 Tax=Rhodanobacter denitrificans RepID=I4WZB6_9GAMM
Transcriptional repressor NrdR {ECO:0000256|HAMAP-Rule:MF_00440, ECO:0000256|SAAS:SAAS00087559}; TaxID=1121014 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae
transcriptional regulator NrdR
SCNpilot_BF_INOC_scaffold_156_52
Pseudoxanthomonas suwonensis, Pseudoxanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(63839..65092)
DNA (1254bp) protein (418aa)
Serine hydroxymethyltransferase {ECO:0000256|HAMAP-Rule:MF_00051}; Short=SHMT {ECO:0000256|HAMAP-Rule:MF_00051};; Short=Serine methylase {ECO:0000256|HAMAP-Rule:MF_00051};; EC=2.1.2.1 {ECO:0000256|HAM
Serine hydroxymethyltransferase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WJA2_9GAMM
glyA; glycine/serine hydroxymethyltransferase
SCNpilot_BF_INOC_scaffold_156_53
GWF1_Xanthomonadales_69_6_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(65284..65775)
DNA (492bp) protein (164aa)
acetyltransferase; K03789 ribosomal-protein-alanine N-acetyltransferase [EC:2.3.1.128] Tax=GWF1_Xanthomonadales_69_6_curated
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI00035EEB79
ribosomal-protein-alanine acetyltransferase
SCNpilot_BF_INOC_scaffold_156_54
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(65788..66291)
DNA (504bp) protein (168aa)
Uncharacterized protein {ECO:0000313|EMBL:AGG87994.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" sourc
SCNpilot_BF_INOC_scaffold_156_55
RLO_Rhodospirillales_67_15, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(66281..66895)
DNA (615bp) protein (205aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI00037B4826
ABC transporter Tax=RIFCSPLOWO2_12_FULL_Rhodospirillales_67_15_curated
SCNpilot_BF_INOC_scaffold_156_56
RBG_16_Gammaproteobacteria_51_14_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(66892..67818)
DNA (927bp) protein (309aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI000371CE8E
hypothetical protein Tax=RBG_16_Gammaproteobacteria_51_14_curated
hypothetical protein
SCNpilot_BF_INOC_scaffold_156_57
RLO_Gammaproteobacteria_47_11, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(67886..68686)
DNA (801bp) protein (267aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI00036826E3
ABC-type transport system; K02065 putative ABC transport system ATP-binding protein Tax=RifCSPlowO2_12_Gammaproteobacteria_47_11_curated
ATP-binding component of ABC superfamily
SCNpilot_BF_INOC_scaffold_156_58
Solemya velum gill symbiont, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(68689..69486)
DNA (798bp) protein (266aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI0003828279
Uncharacterized protein {ECO:0000313|EMBL:KHF25850.1}; TaxID=2340 species="Bacteria; Proteobacteria; Gammaproteobacteria; sulfur-oxidizing symbionts.;" source="Solemya velum gill symbiont.;"
putative ABC transporter permease protein
SCNpilot_BF_INOC_scaffold_156_59
RBG_16_Gammaproteobacteria_51_14_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(69474..69827)
DNA (354bp) protein (118aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI00037F3AF4
anti-anti-sigma regulatory factor Tax=RBG_16_Gammaproteobacteria_51_14_curated
anti-anti-sigma regulatory factor
SCNpilot_BF_INOC_scaffold_156_60
R_Gammaproteobacteria_61_13, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(69824..71530)
DNA (1707bp) protein (569aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI00037CD268
Serine phosphatase RsbU; K07315 sigma-B regulation protein RsbU (phosphoserine phosphatase) Tax=RIFCSPLOWO2_02_FULL_Gammaproteobacteria_61_13_curated
putative phosphoserine phosphatase RsbU like protein
Displaying items 31-60 of 94 in total

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