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SCNpilot_BF_INOC_scaffold_106_60

Organism: SCNpilot_BF_INOC_Xanthomonadales_64_24

near complete RP 52 / 55 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: 72839..73531

Top 3 Functional Annotations

Value Algorithm Source
Pseudouridine synthase n=1 Tax=Rhodanobacter sp. 115 RepID=I4WSJ9_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 59.6
  • Coverage: 230.0
  • Bit_score: 300
  • Evalue 1.00e-78
23S RNA-specific pseudouridylate synthase {ECO:0000313|EMBL:EIM02441.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" sourc similarity UNIPROT
DB: UniProtKB
  • Identity: 59.6
  • Coverage: 230.0
  • Bit_score: 300
  • Evalue 1.50e-78
pseudouridylate synthase similarity KEGG
DB: KEGG
  • Identity: 59.4
  • Coverage: 229.0
  • Bit_score: 294
  • Evalue 3.60e-77

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Taxonomy

Rhodanobacter sp. 115 → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 693
ATGATCCTCTACAGCGACGAACACATTGTCGTCGTCGACAAGCCCGCCGGCATCCCCGTGCATCGCAGTCGCCTGGTCAACGACGGCGACGTCTACCTGATCGACCAGGTGCGGGCACTTGTCGATGGCCCCCTGCACCTGATCCATCGGCTTGATCGCGCCACCAGCGGCGTGCTGCTGATCGGACGCAATGCCGAAGTGGCCGGCACGCTCGGCCGCCAGTTCATGCAGCGCGAAGTCGAAAAGACCTATCTCGCAGTCTGTCGCGGCTGGCCGGAGGAAGTGGGCGAAATCGATTACCCGCTGCCCGGCGTGCGCGAGAACAGCGATCGCAAACCGGCGCTGACGCGCTGGAAACGCCTGGCCACGATCGAAGTGCCGATCGCCATCAATCGCTATCCGCAACAACGCTACGCCCTGGTCGAAGTCTCGCCCGAAACCGGTCGCTACCGGCAGATCCGCCGTCACTTCGCCCACTTGCGCCATCCACTGATCGGCGACACCAGCCACGGTCGCACCGAACACAATCGCCTGTTCAAGCAACACTACAACGTGCACCGCCTGCTGCTGCACGCCTGGCGCCTGCAATTCGATCACCCGGTCGAGGCCAAGCGTATGCACATCGAGGCACCGCTCGACGCCGAATTCGGCGGATTGCTGGAACGCTTTGGCTGGACGATTGCGAGCGCCTGA
PROTEIN sequence
Length: 231
MILYSDEHIVVVDKPAGIPVHRSRLVNDGDVYLIDQVRALVDGPLHLIHRLDRATSGVLLIGRNAEVAGTLGRQFMQREVEKTYLAVCRGWPEEVGEIDYPLPGVRENSDRKPALTRWKRLATIEVPIAINRYPQQRYALVEVSPETGRYRQIRRHFAHLRHPLIGDTSHGRTEHNRLFKQHYNVHRLLLHAWRLQFDHPVEAKRMHIEAPLDAEFGGLLERFGWTIASA*