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SCNpilot_BF_INOC_scaffold_211_101

Organism: SCNpilot_BF_INOC_Xanthomonadales_64_24

near complete RP 52 / 55 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: 124903..125499

Top 3 Functional Annotations

Value Algorithm Source
Ribosomal RNA small subunit methyltransferase D {ECO:0000256|PIRNR:PIRNR004553}; EC=2.1.1.171 {ECO:0000256|PIRNR:PIRNR004553};; TaxID=1543381 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xa similarity UNIPROT
DB: UniProtKB
  • Identity: 57.9
  • Coverage: 195.0
  • Bit_score: 224
  • Evalue 1.20e-55
RNA methyltransferase, RsmD family n=1 Tax=Frateuria aurantia (strain ATCC 33424 / DSM 6220 / NBRC 3245 / NCIMB 13370) RepID=H8L2C4_FRAAD similarity UNIREF
DB: UNIREF100
  • Identity: 59.8
  • Coverage: 184.0
  • Bit_score: 218
  • Evalue 7.70e-54
RsmD family RNA methyltransferase similarity KEGG
DB: KEGG
  • Identity: 59.8
  • Coverage: 184.0
  • Bit_score: 218
  • Evalue 2.20e-54

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Taxonomy

Oleiagrimonas soli → Oleiagrimonas → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 597
ATGATCCCCGTGAAGCGTCCTGCCCAAGGCAACGCCGGCAAGCTGCGCATCGTCGCCGGCACGCTGCGCGGCAGCCGCATCGATGTGATCGAGCGTGACGGCTTGCGCCCGACCAGCGACCGCGTGCGCGAGACGCTGTTCAACTGGCTGGCGCCGATGATCGCGGGCACGAGATGCCTGGACCTGTTTGCCGGAACCGGCGCACTCGGCATCGAGGCGATTTCACGGGGTGCCGGCTCCTGCACCTTCATCGAGCGTGATCGCGATCTCGCCCGTCACCTGCAGGCGACATTGGATCGCCTGAAGATCGACAACGCCCACGTCGTCAATGCCGACGCAATGAACTGGCTGAGCGGACCGGCACAAGCGTTCGATCTGGTCTTTCTCGATCCACCGTTCAGCGCCGGCTTGTGGAGCGATGCCGCTGCCCGACTTGAAAGCGGAGGCTGGCTGGCGGACGCGGCGATGATCCATGTCGAATCGGCAGTCGGCAGCAGCCTTGCCCTGCCGGCGAACTGGCACCTGCACCGTGAAACCCGGGCGGGTGCCGTGCAGTTCGCGCTCTATCGTCGTACTCCGACGATTCCGCTAAGCTAG
PROTEIN sequence
Length: 199
MIPVKRPAQGNAGKLRIVAGTLRGSRIDVIERDGLRPTSDRVRETLFNWLAPMIAGTRCLDLFAGTGALGIEAISRGAGSCTFIERDRDLARHLQATLDRLKIDNAHVVNADAMNWLSGPAQAFDLVFLDPPFSAGLWSDAAARLESGGWLADAAMIHVESAVGSSLALPANWHLHRETRAGAVQFALYRRTPTIPLS*