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SCNpilot_BF_INOC_scaffold_183_36

Organism: SCNpilot_BF_INOC_Xanthomonadales_64_24

near complete RP 52 / 55 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: comp(40631..43420)

Top 3 Functional Annotations

Value Algorithm Source
Type IV conjugative transfer system protein TraN n=1 Tax=Listonella damsela RepID=H1A9J1_LISDA similarity UNIREF
DB: UNIREF100
  • Identity: 27.1
  • Coverage: 669.0
  • Bit_score: 171
  • Evalue 3.90e-39
MULTISPECIES: type IV conjugative transfer system protein TraN {ECO:0000313|EMBL:AJP18255.1}; TaxID=670 species="Bacteria; Proteobacteria; Gammaproteobacteria; Vibrionales; Vibrionaceae; Vibrio.;" sou similarity UNIPROT
DB: UniProtKB
  • Identity: 27.1
  • Coverage: 669.0
  • Bit_score: 171
  • Evalue 5.40e-39
conjugal transfer mating pair stabilization protein TraN similarity KEGG
DB: KEGG
  • Identity: 26.6
  • Coverage: 640.0
  • Bit_score: 168
  • Evalue 9.30e-39

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Taxonomy

Vibrio parahaemolyticus → Vibrio → Vibrionales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 2790
ATGATCACGACATCCCATGCGGCAACGAGCCTGTTTCTGGGCATTTGTCTTGCCGGACTTTCAGTTGCTTCCCTGGCTCAAGACCCGATACAGCAGCAGGCTCGGGAGGGTGAGCTTGCAGGCCGAAGCTATCGTCAGACCCAGCAATTGCGCGAAACGGTGGTTGATGCGGAAGCTCGGACCCTCACGATTCCCGGGCCGACTCAAGACCCAGAAGCGACAACGACGATCCATTTCAATGATCTGATCCCCGGTGATGATCGTGCGGAGCAGGATCGCTTGCAGTCGTTTTATGGAAAGCCCGAAGATCAGATGAAGCGGGCGGCTGAGCAGAAGCATGCCGAGCTGGAACACGAACAGAGTTCTCGGGGTGACGCCTATCGCACGATGCGACATTCAGCGACCATCGAGATGCAAGACATCCATGCTGACGAGCAGCTCACCACGGTGGCAAAACGTGTGGCCAAGCAGCAGGTCATTGAAGGATTGGAGGATGCGTTTCCCGATTGCACGACCACGACCCATTTCCGGAATGTAGGTTTCAAGGAAGCGAGCACCTATCAGGATCGTGCCTGCCAGCGCCTTGCCACTCCACCGACCTGTACGCACAGCCGTGACGTGACCATGGTTCCGACCTCGGGGACCTACGAAAGCGACGAAACGGTGCAATCGAACGTGAGTTTCAGCATCAATGTCCGCGATTACATGCCGGGGTTTGTCGGCGGCACCGTGAGTGCCAACCTCAGTTGGTCGGGCACGGTTGAAGGCGTCTCGATCACGCAGCCGCCTACGGCTCAGAACGCCTATTCGCTTGAAATCTCCATTGTCTATGACTCCTCCGGTTGTGATCCGGCAGTAGGCGGGTGTCCTGAGCAGACTGCGCACATCACCATTGCACTGGAAGCGGCCATCGTGGCGGGGGGCGAAATTGCCAGCTCACCACCTGATTGCCTGGATGGAGATGATGGATTCTGCGCTGCCACCTGGGAGTGCTTGGAAAGTGGACCGAGAGTCGTCAATGGCGTCCTGATCGACGAATCGTCAGCACCCTTTCTGCCGAGGCTCTATTCGGGCGAGCCGCCATCGCAACTGTGTTGGCTGGCCCAAGCCAGCTATCGATGCACGTATCCCGTCGGTGAGGTATGCGGCGAAGGCGCTGGTTCGGGCGGTGTGATGTGCGAAAGCGTCACCGATGCCTCGGTACAACCCAGTAGCTGCGCATCGCTTGAAACCGATCCGCTCTGTGGGAAAGTGCGAACTCAATGCGCGTCCAATGCCGTGGGTCCCGGCGCGTTTTGCTACGTGGAGGTGGACTCCTACCGTTGCAAGACGCAAGCAAATGCGCCGGTTTTGTCTCAGTTCGACGAATTCACGTGCACTACCCCGATTCGCTGCATGGGTTCCGATTGCCTGAAGTTCGACGACAACGATCCAGCCACGACCGCACCTCGGCTCACGCATCAAGAGCAGCTCGGCCTTCTCCAGCATGCGCTTGCTGATTTTGACCCCGCCTGCACGGGCGTGCCGTGCCGACACTTCGTGGGCGAGACACTGAAATGCCATAGGGCAACCGGTGGGAACTTGTCCTTTTGCACCGAGGAAAACAGTGTCGAATCGAAGTTCCTTTATCTACGCTGGTTTGATATCCAGACACGCCGAGCAGCGGCCATTGCGATGGAGCAGGCCGATGATGGGCGCGATGTCGGCAATTGGGCGCAGCTTCAACAGTCCAGCAATTGGAATCTCGGTACGCTGCAGGCGTCATACCTGACATCGATCAAGGAGGGTATTCGATCCAACGGGGAATCTCCCCGGCGCATCACGGTCGAGGCACCCAGCACCCAGGAGCAGTTCGAGGACATGCTGGGTCAAAAACCGGAGCTGATCAATCTCGCCAAGGTGTATGGACAATTTGTCCGAACCGTCGAATTGCCGACCTCTGGATGGGATGGAAGCGCGGAGGAGTTCGAGCTGCACAAGAAGCGCGGTCTTCACCAGTGCTTGCATGTCGGTGACTTCTGCCAGGCGGGCGGCGGCAGCGCGTGTCCGAGCATTGTCGAGTCCTATTGTTGCTTCTCGACCGCCTTGTCGAAGTCTGTGCATGAGCATCTCGGGACGGATTTTGGTGATGCGCGTGCGCCGACCTGCTCGGCCGGTACGGATGTGCCGCTGCAGCAAATCCTTGCCGACACGTCCTTTGTCGCGTCTGAATGGACGGCGATGCAAACGCTTGCTGGGCGTCAGCCGAATTTCGACACGATGGATTCAATGTCGGGCGACGAAAACCTGACTGGTCACGGAAGCACGATCCGTTTGAGCGACCAGGAGCGCGATTCGCTGGTGACGCGAACCGAAGCGATGCTTTCGAGTTTGAATGGCCAGGGAATCCATGCTGCAGTCGAGGCGGACGCGAGAACCCAGATCCCTGCTGCAGTACGTGATCCAATTGGCCCGGGCACTGTGTCGTTCAGTCCGGCAATCTATTTTGGTGATGGCAGCCGAGGCATCGTGGCGAGCCTGCTGCGAAACGGAAAGCAAGGAGCAGTGTCCGCATCCTTCATGGTGACTTCGCCGGCCGGATCGAATGGAGTCGTGTTTCCATCGAGTGGACGCGTGTCCTGGGCCGACGGTGAGGACGGGTCCAAGCAAATACTGTTGAAGGTTGATGGTGACCGGGTCACATCAACCGAGCAGACGTTCCATATTGTCGTGGGCTCAACGAGCGGGGGCCTCAGTCTGGGTGATCGACCGTCCGCATCGATCATTCTCAAATCTCGTCATCAGCCTTGA
PROTEIN sequence
Length: 930
MITTSHAATSLFLGICLAGLSVASLAQDPIQQQAREGELAGRSYRQTQQLRETVVDAEARTLTIPGPTQDPEATTTIHFNDLIPGDDRAEQDRLQSFYGKPEDQMKRAAEQKHAELEHEQSSRGDAYRTMRHSATIEMQDIHADEQLTTVAKRVAKQQVIEGLEDAFPDCTTTTHFRNVGFKEASTYQDRACQRLATPPTCTHSRDVTMVPTSGTYESDETVQSNVSFSINVRDYMPGFVGGTVSANLSWSGTVEGVSITQPPTAQNAYSLEISIVYDSSGCDPAVGGCPEQTAHITIALEAAIVAGGEIASSPPDCLDGDDGFCAATWECLESGPRVVNGVLIDESSAPFLPRLYSGEPPSQLCWLAQASYRCTYPVGEVCGEGAGSGGVMCESVTDASVQPSSCASLETDPLCGKVRTQCASNAVGPGAFCYVEVDSYRCKTQANAPVLSQFDEFTCTTPIRCMGSDCLKFDDNDPATTAPRLTHQEQLGLLQHALADFDPACTGVPCRHFVGETLKCHRATGGNLSFCTEENSVESKFLYLRWFDIQTRRAAAIAMEQADDGRDVGNWAQLQQSSNWNLGTLQASYLTSIKEGIRSNGESPRRITVEAPSTQEQFEDMLGQKPELINLAKVYGQFVRTVELPTSGWDGSAEEFELHKKRGLHQCLHVGDFCQAGGGSACPSIVESYCCFSTALSKSVHEHLGTDFGDARAPTCSAGTDVPLQQILADTSFVASEWTAMQTLAGRQPNFDTMDSMSGDENLTGHGSTIRLSDQERDSLVTRTEAMLSSLNGQGIHAAVEADARTQIPAAVRDPIGPGTVSFSPAIYFGDGSRGIVASLLRNGKQGAVSASFMVTSPAGSNGVVFPSSGRVSWADGEDGSKQILLKVDGDRVTSTEQTFHIVVGSTSGGLSLGDRPSASIILKSRHQP*