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SCNpilot_BF_INOC_scaffold_183_42

Organism: SCNpilot_BF_INOC_Xanthomonadales_64_24

near complete RP 52 / 55 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: comp(46802..49372)

Top 3 Functional Annotations

Value Algorithm Source
Type-IV secretion system protein TraC n=1 Tax=Rhodanobacter denitrificans RepID=M4NGA1_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 49.8
  • Coverage: 829.0
  • Bit_score: 817
  • Evalue 1.20e-233
type-IV secretion system protein TraC similarity KEGG
DB: KEGG
  • Identity: 49.8
  • Coverage: 829.0
  • Bit_score: 817
  • Evalue 3.50e-234
  • rbh
Type-IV secretion system protein TraC {ECO:0000313|EMBL:AGG89112.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanob similarity UNIPROT
DB: UniProtKB
  • Identity: 49.8
  • Coverage: 829.0
  • Bit_score: 817
  • Evalue 1.70e-233

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Taxonomy

Rhodanobacter denitrificans → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 2571
ATGAGGGGTGCGCGTTTTATCTGGCATCTGGAGTTTCCCTTGGATATCAAGCAACGCCTGGACATCAAGGAGCGCTTGTCGCACCTCGCTGAAGCGGCACTTCGAAAGCCCTTGAAGCTCATCAGTGACACCTTCCGCGGCGCGGCACTGGGTCCGTCGTTTGAGTCCGAGATCCTGCCCGCATGGCTGCAGGCAATTGATTACGACCTCGAGGATGATTTGTACATCCTGGAGGCCGGTGGCCGCGGGTTTGGATTCATTGGCCGTCCGCTGTCGGGCATTGACCCGCGTGACTTCGAGAAGCTGCAGGTGCTTCTTGGTCTCGGCTATCCCGGCGACACGGTAATGTCGTTTTGCCTGTGGACCTCGCCTGATGTCGAGCACACCCTGGCAACATACAAGGATCAGCGCCGGGTTCCAGCGAGCTCACCCTTGGCGGCGATGCGCGACGAACGCATCTCGTTCGTGAGGGAGGGCGCAAGCGCATCCATTGTGGATGGGTCTGATATCCGTTTGCACAACGCACAGCTGGTCATCACGGTCAAAGTACCGACCGGACAAAATCCTTCGCGGGATACCCTTGACTCCATCATTGAGCTACGCAAGGAAGTCGAAGCGACACTGAAAAGCTGCGGGTTCCGGCTGGAGGTTCTGACTGCCCCGAAATACCTGCGCTTCATGCAGACCGTATTCAACTGGAAGCCAGATGCGGCCTGGCGGCGGTCTCCGTCGACCGAGTACACCCCGGATTTCCTGTTGACCGAGCAGATCCTTGATCCGGAAACGAGTGTTGAAGTGGATGAGGATGGCCTAAGCCTGGGTGACCAGAAGGTTCGCCTGTTGTCGGTCAAACGCTATTCGTCGCACGCAGTGTTTGGTCAGGCATTCAAGTACATCGGCGATGCGTTCAGCGGTGCGCGGGGTATCCGCGATCCGCTGCTGGTGACCTTCAACATCTGGTTTGGCAACAATGACACGGATCGCAGCACCCTTTCCCGAGAGTCCGCATGGCTGACCCACCAGGCCGGCACCGGTATTGCTCGCTGGGCGCCACGTGTGCTGATGCAAAAGCACTCCAGCGACGTGGTGATGGCCGCTGTTGAGCAGGGCGATCGCCTAGTGCGCGGCTACCTTGGGCTGGCCGTGATGGGCAAGGACGACGCGGCGACCACCGCTGCGATATCCAACGCAATCACCTACATGCGCGAGTTCGGCTTGACGGTGATGCGCGACAAGTTCTTTTGTGCCCCCCTGTTTGCGAATCTGCTGCCGTTTGGCGCCGACGTGACCGCTGCGGTCAGCCTGCGGCGCTTCAAGCGCTGGGCGACGCGCCATGTGATTCCGCTTCTGCCGATCGCGTCGGAATGGGCCGGTACCGGGACGCCTTCGCTCCTGACCATTTCGCGCAACGGCCAGCTCATGGGTGTCAGCAACTGGGACTCCGACACCAACTACAACTGCATCGTCGCGGCGCAGTCGGGCTCCGGAAAGTCCTTCATGATGAACGACTACATCGCCAACGAGATCATGCGCGGCGGCCGCGTGTGGTGTGTGGACAAGGGCAAGTCCTATCGGAATATCTGTGAATTGCTGGGTGGGCAGGAGCTTTCCTTCGGCCCCGAATCCACGATTTGCCTCAATCCGTTCACCCGCATCATCGACTACAAGGAGGATGCGGACATGCTGTATGGCCTCATCTCCACCATGGCCGCATTGCGTGAGCCATTGTCGAACCTGCAAACCGCTCGCGTAAAGCAGGTCATGCACGAGATCTTCAATGCGAAAGGCAACGCCATGCTGGTTGATGATCTCGCGGCGGGGTTGATCGGCGATGACGATCAGCGCGTCCGTGACGTGGGTCATCAACTGTATCCCTTCACGCAGCAAGGGGAGTACGGCCGGTGGTTCTACGGCCAGTGCAACTACCAGGCAGATGCGAATTTTGTGCTCGTTGAACTCGATGAGCTTGATGGTCGTCAGCATCTGCAACGGGTGGTGTTGCTGCAGCTGATCTTCCAGATCCAGCGCGACATGTACCTCGGCGAGCGCGACCAGAAGAAGATCCTCGTGATTGATGAGGCGTGGGAGCTGTTGGAGGGTCCGGAAACAGGCGTCTTCATCGAGCGGGCCTATCGCCGCTTCCGCAAGTACAACGGCGCCGCGTTCACGATTACGCAAAGCTGCATGGACTACTTCCGTTCGCCGAGCACGCTGCCTATTTTCGAGAATTCCGCCTACAAGCTGATGCTGGGCCAAAGCGGCGAAGCGCTGGCCATGTTGGAGAAGGAGGAGCGTCTGGCGATTGGCCAGCATGGCTTCAATCTGATGCGCACGCTGCGCTCCGTCCAGGGCCAGTATTCGGAAATCTTCTTCCACACCCCCATGGGCTACGGCATTGGCCGCCTCGTTGTCCCGGAACTGACCCGGTTCATCTATTCCACCACGCCCGACGAGGTTGTGAGGATGGGCGAGATGCGCAAGGAAGGTTTGGATCTGATCCAGGCAGCGCAAGTCTTGCGACAAGAACGCAGCAAGCAACGTGCGCCTGTCTTGAATCGCCTGGTCTCGTGA
PROTEIN sequence
Length: 857
MRGARFIWHLEFPLDIKQRLDIKERLSHLAEAALRKPLKLISDTFRGAALGPSFESEILPAWLQAIDYDLEDDLYILEAGGRGFGFIGRPLSGIDPRDFEKLQVLLGLGYPGDTVMSFCLWTSPDVEHTLATYKDQRRVPASSPLAAMRDERISFVREGASASIVDGSDIRLHNAQLVITVKVPTGQNPSRDTLDSIIELRKEVEATLKSCGFRLEVLTAPKYLRFMQTVFNWKPDAAWRRSPSTEYTPDFLLTEQILDPETSVEVDEDGLSLGDQKVRLLSVKRYSSHAVFGQAFKYIGDAFSGARGIRDPLLVTFNIWFGNNDTDRSTLSRESAWLTHQAGTGIARWAPRVLMQKHSSDVVMAAVEQGDRLVRGYLGLAVMGKDDAATTAAISNAITYMREFGLTVMRDKFFCAPLFANLLPFGADVTAAVSLRRFKRWATRHVIPLLPIASEWAGTGTPSLLTISRNGQLMGVSNWDSDTNYNCIVAAQSGSGKSFMMNDYIANEIMRGGRVWCVDKGKSYRNICELLGGQELSFGPESTICLNPFTRIIDYKEDADMLYGLISTMAALREPLSNLQTARVKQVMHEIFNAKGNAMLVDDLAAGLIGDDDQRVRDVGHQLYPFTQQGEYGRWFYGQCNYQADANFVLVELDELDGRQHLQRVVLLQLIFQIQRDMYLGERDQKKILVIDEAWELLEGPETGVFIERAYRRFRKYNGAAFTITQSCMDYFRSPSTLPIFENSAYKLMLGQSGEALAMLEKEERLAIGQHGFNLMRTLRSVQGQYSEIFFHTPMGYGIGRLVVPELTRFIYSTTPDEVVRMGEMRKEGLDLIQAAQVLRQERSKQRAPVLNRLVS*