ggKbase home page

SCNpilot_BF_INOC_scaffold_20_155

Organism: SCNpilot_BF_INOC_Xanthomonadales_64_24

near complete RP 52 / 55 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: comp(181246..181806)

Top 3 Functional Annotations

Value Algorithm Source
Sigma factor, ECF-like family protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AEF5_GEMAT similarity UNIREF
DB: UNIREF100
  • Identity: 52.8
  • Coverage: 180.0
  • Bit_score: 175
  • Evalue 7.00e-41
sigma factor, ECF-like family protein similarity KEGG
DB: KEGG
  • Identity: 52.8
  • Coverage: 180.0
  • Bit_score: 175
  • Evalue 2.00e-41
Sigma factor, ECF-like family protein {ECO:0000313|EMBL:BAH40882.1}; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas auranti similarity UNIPROT
DB: UniProtKB
  • Identity: 52.8
  • Coverage: 180.0
  • Bit_score: 175
  • Evalue 9.80e-41

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Gemmatimonas aurantiaca → Gemmatimonas → Gemmatimonadales → Gemmatimonadetes → Gemmatimonadetes → Bacteria

Sequences

DNA sequence
Length: 561
ATGCCCGACGCACCTGACTCCGAGGAAATAGTCCGCCTGGTTGCACGCTGTGGTCATGGTGACAGCGACGCCCTGAATCACCTGACCCCCATCGTCTATGCGGAGCTCAAGGCACTTGCAGCCAATGCCATGCGCCGCGAGCGCGCGAACCACACGCTGCAGACAACCGCGTTGGTCAATGAAGCCTGTTTGCGCCTGCTCGGTGACGGCGCTGCGAGCATGGCGAATCGTGCCCAGTTCGCCGCGCTCGCGGCGCAGGCAATGCGCCGCGTGCTGGTCGACCATGCGCGCCGGCGCCATGCAGGCAAGCGCCCTGATCCCGCTCAGCGCATTGACATCGTCGAGATCGACCTTGCCAGCGAATCGACGGATCTTGTCGAACTCGACGGCGCGCTCAATCGCCTGGCGGCATTGAGCCCACGCCAGGCACAGGTGGTCGACCTCAAGTTTTTCGCCGGGCTTGAACTCGAGCAGATTGCCGACATGCTCGAAATCGCGCGTCCGACCGTCGTCCGCGATTGGCGCATGGCGCGTGCCTGGCTGCAGCGCGAACTGGCCTGA
PROTEIN sequence
Length: 187
MPDAPDSEEIVRLVARCGHGDSDALNHLTPIVYAELKALAANAMRRERANHTLQTTALVNEACLRLLGDGAASMANRAQFAALAAQAMRRVLVDHARRRHAGKRPDPAQRIDIVEIDLASESTDLVELDGALNRLAALSPRQAQVVDLKFFAGLELEQIADMLEIARPTVVRDWRMARAWLQRELA*