ggKbase home page

You do not have permission to do that.

Please email help@ggkbase.berkeley.edu for help.

SCNpilot_BF_INOC_scaffold_20_207

Organism: SCNpilot_BF_INOC_Xanthomonadales_64_24

near complete RP 52 / 55 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: comp(241560..242393)

Top 3 Functional Annotations

Value Algorithm Source
triosephosphate isomerase (EC:5.3.1.1) similarity KEGG
DB: KEGG
  • Identity: 69.8
  • Coverage: 248.0
  • Bit_score: 345
  • Evalue 1.30e-92
Triosephosphate isomerase {ECO:0000256|HAMAP-Rule:MF_00147, ECO:0000256|RuleBase:RU000517}; Short=TIM {ECO:0000256|HAMAP-Rule:MF_00147};; EC=5.3.1.1 {ECO:0000256|HAMAP-Rule:MF_00147, ECO:0000256|RuleB similarity UNIPROT
DB: UniProtKB
  • Identity: 69.8
  • Coverage: 248.0
  • Bit_score: 345
  • Evalue 6.30e-92
triosephosphate isomerase n=1 Tax=Dyella japonica RepID=UPI000307DC5F similarity UNIREF
DB: UNIREF100
  • Identity: 69.8
  • Coverage: 248.0
  • Bit_score: 345
  • Evalue 4.50e-92

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Dyella japonica → Dyella → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 834
ATGCGGTTTGCCGCAATCGACATGCGCGGCTATGCTTCGCGCCCGTTGACCACTTCGATCCAGCACATGCGCCGCAGACTCGTAGCCGGAAACTGGAAAATGCATGGCACGCGCCGGGATTCCGCCGCGCTCGTGGCAGACCTGGCCGCAGCGCTGCCGTTGCCTGTGGATGTCGCCGTGATTCCACCGTTCCCCTATCTGGCCGAGCTGATCGGTGCGGGCAGCAGTTCCGGGCTTCGCTTCGGCGCGCAGGATCTCAGCGAACATGCGCAGGGTGCCTATACCGGCGAAGTGGCCGGCGCGATGCTGAAGGACATCGGCTGCGATTACGTGCTGGTCGGTCATTCCGAACGACGCCAGTACCACGCGGAAACGAACGAGCTGGTCGCGCGCAAGTTCGTTGCCGCGCAGGCAGCGGGCCTGCTGCCGATTCTCTGCGTTGGCGAGTTGCTGGAGCATCGCGAAGGCGGGCAGACCGAGGCGATCGTCGGTGCCCAGCTCGATGCCGTGCTGGATCTGGCCGGAATTGCCGCGTTCAGCCAGGCCGTGGTTGCCTACGAGCCGGTCTGGGCCATAGGCACGGGGAAAACCGCGACCCCGCAGCAGGCCCAGCAGGTTCATGCGTTCGTGCGTGACAAATTCGCGAAGCAGGATGCTAGAATAGCCAGCTCGCTGCGTCTCCTGTACGGAGGCAGCGTAAAGGCCGCCAATGCTGCCGAGCTGTTTGCCCAGTCCGATATCGATGGTGGACTGATTGGCGGCGCCTCGTTGCTGGCGGCTGATTTTATTGCGATATGCACGGCCGCTGCGGCTGCCGCAAACCAGGGTTCCTGA
PROTEIN sequence
Length: 278
MRFAAIDMRGYASRPLTTSIQHMRRRLVAGNWKMHGTRRDSAALVADLAAALPLPVDVAVIPPFPYLAELIGAGSSSGLRFGAQDLSEHAQGAYTGEVAGAMLKDIGCDYVLVGHSERRQYHAETNELVARKFVAAQAAGLLPILCVGELLEHREGGQTEAIVGAQLDAVLDLAGIAAFSQAVVAYEPVWAIGTGKTATPQQAQQVHAFVRDKFAKQDARIASSLRLLYGGSVKAANAAELFAQSDIDGGLIGGASLLAADFIAICTAAAAAANQGS*