ggKbase home page

SCNpilot_BF_INOC_scaffold_20_267

Organism: SCNpilot_BF_INOC_Xanthomonadales_64_24

near complete RP 52 / 55 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: comp(301454..301996)

Top 3 Functional Annotations

Value Algorithm Source
50S ribosomal protein L5 {ECO:0000256|HAMAP-Rule:MF_01333, ECO:0000313|EMBL:KIJ72369.1}; TaxID=1245935 species="Bacteria; Cyanobacteria; Nostocales; Microchaetaceae; Tolypothrix.;" source="Tolypothrix similarity UNIPROT
DB: UniProtKB
  • Identity: 82.2
  • Coverage: 180.0
  • Bit_score: 312
  • Evalue 2.90e-82
50S ribosomal protein L5 id=2431991 bin=GWF1_Xanthomonadales_69_6 species=unknown genus=unknown taxon_order=Xanthomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWF1_Xanthomonadales_69_6 organism_group=Gammaproteobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 82.7
  • Coverage: 179.0
  • Bit_score: 309
  • Evalue 1.80e-81
ribosomal protein L5 similarity KEGG
DB: KEGG
  • Identity: 79.8
  • Coverage: 178.0
  • Bit_score: 305
  • Evalue 7.20e-81

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Tolypothrix campylonemoides → Tolypothrix → Nostocales → Cyanobacteria → Bacteria

Sequences

DNA sequence
Length: 543
ATGACAACGCGTCTTGAAACCATCTACAAAGAAACGATCGTTCCGAAGCTGACCGAGCGTTTCGGCTACAAGAATCCGATGCAGGTGCCGCGCCTGTCCAAGGTCACGCTCAACATGGGCGTGGGTGAGGCGGTCGGCAACAAGAAGATTCTCGAGAACGCCGTGGCCGACATGACCAAGATTGGCGGACAGAAGCCGATCATCACGCTGTCGAAGAAGTCCATCGCGACCTTCAAGATCCGTGACAACTGGCCGATCGGCTGCAAGGTCACCTTGCGCCGTGCGCAGATGTTCGAGTTTGTCGATCGCCTGGTCAACGTCTCGCTGCCGCGCGTGCGCGACTTCCGCGGCATTTCCGGTCGTTCGTTCGACGGACGCGGCAACTACAACATGGGCGTCAAGGAACAGATCATCTTTCCGGAGATCGATTTCGACCAGATTGACGCATTGCGCGGCATGGATATCGCGGTCACCACGACTGCGCGTACCGACGAAGAAGCGAAGGCGTTGCTTGAAGCCTTTGGTTTTCCGTTCCGCAACTAA
PROTEIN sequence
Length: 181
MTTRLETIYKETIVPKLTERFGYKNPMQVPRLSKVTLNMGVGEAVGNKKILENAVADMTKIGGQKPIITLSKKSIATFKIRDNWPIGCKVTLRRAQMFEFVDRLVNVSLPRVRDFRGISGRSFDGRGNYNMGVKEQIIFPEIDFDQIDALRGMDIAVTTTARTDEEAKALLEAFGFPFRN*