ggKbase home page

SCNpilot_BF_INOC_scaffold_2432_2

Organism: SCNpilot_BF_INOC_Xanthomonadales_64_24

near complete RP 52 / 55 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: 2444..3016

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01P44_SOLUE similarity UNIREF
DB: UNIREF100
  • Identity: 43.1
  • Coverage: 195.0
  • Bit_score: 141
  • Evalue 8.80e-31
ECF subfamily RNA polymerase sigma-24 factor similarity KEGG
DB: KEGG
  • Identity: 43.1
  • Coverage: 195.0
  • Bit_score: 141
  • Evalue 2.50e-31
RNA polymerase, sigma-24 subunit, ECF subfamily {ECO:0000313|EMBL:ABJ88576.1}; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" so similarity UNIPROT
DB: UniProtKB
  • Identity: 43.1
  • Coverage: 195.0
  • Bit_score: 141
  • Evalue 1.20e-30

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Candidatus Solibacter usitatus → Candidatus Solibacter → Solibacterales → Solibacteres → Acidobacteria → Bacteria

Sequences

DNA sequence
Length: 573
ATGGCCGACCTTTCGCCCGCGATCACCTGTGCACTTTCCGATGCCGAAGAGCCGGCTGGCCGTGATCGCCTTTTCGCCCTGGTCTACGAGGACATGCTGCACATTGCCCGCGCCCAGCTTTCGCGCAACCATCGCGGCAATACGCTGGATACCCGAGCCCTGGTCAGCGAGGCGTATCTCAAACTTGAACGCGCCGGATTCGACTATGCCAACCGCAAGCATTTCTACGCGACGGTCGCCTGCGCGATGCGCCAGGTCGCCATCGACCACGCGCGATCGCGACTCGCCGGGCGGCGTGGCGGCGATGCGGTCTTCGTTGACATTGATTCCCTTGCCGATCATCCGCTGCCGGTCGATGCGCAAGCCGAGCAGCTGATCGCGATTGACGATGCGTTGACCAAGCTCGCAGCACTCGACGAGCGCCTGGTCAAGGTGATCGAACTGCGCTTTTTCGCCGGCCTCGAAGTCAGCGAGATCGCCGATCTGCTCGGCCTTTCCGAACCCACCATCAAACGCGACACGCGTGCGGCAAAGGCTTTCCTGCAGCGCGAACTGGCACGCCCGCCCGGCTAG
PROTEIN sequence
Length: 191
MADLSPAITCALSDAEEPAGRDRLFALVYEDMLHIARAQLSRNHRGNTLDTRALVSEAYLKLERAGFDYANRKHFYATVACAMRQVAIDHARSRLAGRRGGDAVFVDIDSLADHPLPVDAQAEQLIAIDDALTKLAALDERLVKVIELRFFAGLEVSEIADLLGLSEPTIKRDTRAAKAFLQRELARPPG*