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SCNpilot_BF_INOC_scaffold_84_91

Organism: SCNpilot_BF_INOC_Xanthomonadales_64_24

near complete RP 52 / 55 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: comp(103979..105172)

Top 3 Functional Annotations

Value Algorithm Source
hemolysin D n=1 Tax=Pseudomonas geniculata RepID=UPI00029A9090 similarity UNIREF
DB: UNIREF100
  • Identity: 71.4
  • Coverage: 388.0
  • Bit_score: 515
  • Evalue 3.60e-143
RND family efflux transporter MFP subunit similarity KEGG
DB: KEGG
  • Identity: 71.5
  • Coverage: 386.0
  • Bit_score: 515
  • Evalue 1.00e-143
Acra3 protein {ECO:0000313|EMBL:CCP13262.1}; TaxID=1118156 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia gro similarity UNIPROT
DB: UniProtKB
  • Identity: 71.1
  • Coverage: 388.0
  • Bit_score: 515
  • Evalue 5.00e-143

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Taxonomy

Stenotrophomonas maltophilia → Stenotrophomonas → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1194
ATGACCGGCTCACTGTTTCCAAGACTCCTTGCCCTTCTTGCTGCCTGCCTCGCCGTGGCTGCCTGCAGCGGCGAAGTGGCGGCCCCACCGCGACCTGCGGCCAAGGTCACCGTGGTCACCCTCAAAGCCGGGCCGGTGACCCTGGTCCGCGAATTGCCGGGCCGCGCCTCGCCGTTCCGGGTTGCCGAAGTGCGCCCGCAAGTCACCGGCATCATCGCCAAGCGCCTGTTCACCGAAGGCAGCCAGGTCGAGCAGGGACAAGCGCTGTACCAGATCGATGACGCCGGTTATCGCGCCGCCGCAAACAGCGCCCGCGCCCAGCTCGCCCGCGCCGAGGCCACCTTGACCTCCGCGCGCCTGACCGCCAAGCGCATCGGCGAACTGGCGCTGATCGATGCGGTCAGCGTGCAGGAAAACGAGAATGCGATTGCCGCATTGAAACTGGCCGAGGCCGATGCCGGTGCCGCGCGCGCCGACCTCGACAGCGCCAACGTCATTCTCGCCTATGCCCGCATCAGCGCGCCGATCAGCGGCCGCATTGGCAAGTCCTCGGTGACCCAGGGTGCCCTGGTGACCGCCAACCAGGCCACGCCGCTGGCCACCGTGCACCAGCTGGATCCCATCTACATCGACCTGACCCAGTCCTCGGCGGAACTGCTGCAGCTGCGCCGCGCCCTGACCGCCGGCAGCCTGCAGGACACCAGCGGCCTGCCGGTGACGATCCTGCTCGAGGACGGCAGCGAATTCAGCCACAAGGGCACGCTTGAATTCGCCGAAGTCAGCGTCGATCCGGCCACCGGCAGTTTCAACCTTCGTGTAAAGGTGGACAATCCGCAGGGCCTGATCATGCCCGGCATGTACGTGCGCGCGCTGCTCAGCAAGGGCGTGCGCGAGGACGCGATCCTGGTGCCGATGCAGGGCATCACCCGCGATCCCAAGGGCAAAGCCAGCGCGATGGTGGTCGATGGTGAAGGCAAGGTCGCCGTGCGTGCGGTCGAGGTCAGCACCGCCATTGGCGACAAGTGGCTGGTCGAGGATGGCCTCGAGGCCGGCGACAAGGTGATTGTCGAAGGCCTGCAGAAGATCGGCCCGGGCATGCCGGTGCAGTTCACCGAGAAGGGCGTGACGCCCGCCGCCGCGCCGCCGACACAACCCGATGCAGCCAAGGCTGCCGCTCCGGCCCCCAAGCAGTAA
PROTEIN sequence
Length: 398
MTGSLFPRLLALLAACLAVAACSGEVAAPPRPAAKVTVVTLKAGPVTLVRELPGRASPFRVAEVRPQVTGIIAKRLFTEGSQVEQGQALYQIDDAGYRAAANSARAQLARAEATLTSARLTAKRIGELALIDAVSVQENENAIAALKLAEADAGAARADLDSANVILAYARISAPISGRIGKSSVTQGALVTANQATPLATVHQLDPIYIDLTQSSAELLQLRRALTAGSLQDTSGLPVTILLEDGSEFSHKGTLEFAEVSVDPATGSFNLRVKVDNPQGLIMPGMYVRALLSKGVREDAILVPMQGITRDPKGKASAMVVDGEGKVAVRAVEVSTAIGDKWLVEDGLEAGDKVIVEGLQKIGPGMPVQFTEKGVTPAAAPPTQPDAAKAAAPAPKQ*