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SCNpilot_BF_INOC_scaffold_9254_3

Organism: SCNpilot_BF_INOC_Xanthomonadales_64_24

near complete RP 52 / 55 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: 2057..2785

Top 3 Functional Annotations

Value Algorithm Source
LysR family transcriptional regulator n=1 Tax=Pseudomonas aeruginosa VRFPA05 RepID=V4WM45_PSEAI similarity UNIREF
DB: UNIREF100
  • Identity: 94.2
  • Coverage: 257.0
  • Bit_score: 488
  • Evalue 4.90e-135
LysR family transcriptional regulator {ECO:0000313|EMBL:ESR01111.1}; TaxID=1263865 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pse similarity UNIPROT
DB: UniProtKB
  • Identity: 92.6
  • Coverage: 257.0
  • Bit_score: 481
  • Evalue 8.30e-133
transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 91.4
  • Coverage: 257.0
  • Bit_score: 475
  • Evalue 1.20e-131

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Taxonomy

Pseudomonas chloritidismutans → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 729
GTGCCGGTGGGGCGGCCCCTTTGGATCGAACGCTTTGGCATTGCCAAGAGCGTCGAACACGGTCACGATTTAAACCACGTTAAACTTAACTCATTCAACGGCTTCGAGATCAGTTGCCACGAGTTCACCGCCTGGGGGGAGCTGGACGTGGAATCGAGTGACATCACCGCCGAAATACGCATGGCCGTCCTCGGCGAATGGGTGCCTCCGCAGCTCGCCGACGTGCTCGCCCTGCAGCGTGCCGAAGAGCCGGAGACCCATGCCATCCTGGCCGGCTGGACAGATCCCGGTCGAGGCGCGGAGATGCCGGACGACGGCTTCGACTTCGCCTTGTCTGCGGTTGCCCGGCAGTGGCCTGGCTGGGTATGCGAGCCGCTGTGGCATGACACGCTGGCGGTCGCCGTGGCCAAGCGCTCCCACCTGCTGGCCTACCGTGAAGTGCCGTGCGGTGAAGTGCTCAAGCAGCCCTTGATCTGCTCGCAGTCCACGGCCGATGAACCATGGCGCATGACCGTGCAGCGCGTGTTCGAGAACGCGCTGCAGGAGCGGGAGCAAACGGTGGAGACATTCGATGTGGCGATGACGCTGGTTGCCGCCGGGTACGGGATCGCCATTGCGCCGCCGCTGGCCGGCGCACCAACGATCGTGATGGCTTACCTGCTCCGTCGCAACGCCTCTTTGTCAGACCCCCAGGCAAGATTCGCCCGCCGCGCGCGCTTGGTGTCCTGA
PROTEIN sequence
Length: 243
VPVGRPLWIERFGIAKSVEHGHDLNHVKLNSFNGFEISCHEFTAWGELDVESSDITAEIRMAVLGEWVPPQLADVLALQRAEEPETHAILAGWTDPGRGAEMPDDGFDFALSAVARQWPGWVCEPLWHDTLAVAVAKRSHLLAYREVPCGEVLKQPLICSQSTADEPWRMTVQRVFENALQEREQTVETFDVAMTLVAAGYGIAIAPPLAGAPTIVMAYLLRRNASLSDPQARFARRARLVS*