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SCNpilot_BF_INOC_scaffold_12767_3

Organism: SCNpilot_BF_INOC_Pseudomonadales_partialdouble_39_4

near complete RP 49 / 55 MC: 9 BSCG 43 / 51 MC: 5 ASCG 12 / 38 MC: 3
Location: comp(1938..2234)

Top 3 Functional Annotations

Value Algorithm Source
Integration host factor subunit alpha n=168 Tax=Acinetobacter RepID=IHFA_ACIB3 similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 98.0
  • Bit_score: 193
  • Evalue 7.70e-47
Bacterial nucleoid DNA-binding protein similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 98.0
  • Bit_score: 193
  • Evalue 2.20e-47
Integration host factor subunit alpha {ECO:0000256|HAMAP-Rule:MF_00380, ECO:0000256|RuleBase:RU004485}; Short=IHF-alpha {ECO:0000256|HAMAP-Rule:MF_00380};; TaxID=1310669 species="Bacteria; Proteobacte similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 98.0
  • Bit_score: 193
  • Evalue 1.10e-46

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Taxonomy

Acinetobacter baumannii → Acinetobacter → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 297
ATGACAGCATTAACAAAAGCAGATATGGCGGACCATTTAAGTGAGCTTACTAGCTTAAATCGCCGTGAAGCAAAACAAATGGTCGAGCTATTTTTTGATGAAATCAGCCAAGCTTTAATCGCGGGTGAACAAGTCAAACTTTCTGGCTTCGGCAATTTTGAGTTGCGTGACAAACGTGAACGTCCGGGACGTAATCCAAAGACAGGTGAGGAGATTCCGATCTCTGCTCGTCGTGTGGTAACGTTCCGAGCGGGTCAGAAATTTAGACAGCGTGTTGGAAATGAGCAGATCGATTGA
PROTEIN sequence
Length: 99
MTALTKADMADHLSELTSLNRREAKQMVELFFDEISQALIAGEQVKLSGFGNFELRDKRERPGRNPKTGEEIPISARRVVTFRAGQKFRQRVGNEQID*