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SCNpilot_BF_INOC_scaffold_15524_2

Organism: SCNpilot_BF_INOC_Pseudomonadales_partialdouble_39_4

near complete RP 49 / 55 MC: 9 BSCG 43 / 51 MC: 5 ASCG 12 / 38 MC: 3
Location: 972..2048

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor RpoH n=2 Tax=Acinetobacter RepID=N9MPL6_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 99.5
  • Coverage: 199.0
  • Bit_score: 384
  • Evalue 1.50e-103
RNA polymerase sigma factor RpoH {ECO:0000256|HAMAP-Rule:MF_00961}; RNA polymerase sigma-32 factor {ECO:0000256|HAMAP-Rule:MF_00961}; TaxID=1217699 species="Bacteria; Proteobacteria; Gammaproteobacter similarity UNIPROT
DB: UniProtKB
  • Identity: 99.5
  • Coverage: 199.0
  • Bit_score: 384
  • Evalue 2.10e-103
RNA polymerase factor sigma-32 similarity KEGG
DB: KEGG
  • Identity: 96.0
  • Coverage: 201.0
  • Bit_score: 375
  • Evalue 1.50e-101

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Taxonomy

Acinetobacter sp. CIP 110321 → Acinetobacter → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1077
ATGACTACTGACAGCAGCAATCAATTGATGCCCCTGTCATTGTCTGCGCCAGGCGTAAATCTTGGTGCATATATCAGTACTGTCAATCAAATTCCAATTCTAACGGCCGAGCAAGAAAAAGAACTTGCTGAGCGTTATTATTATGACCAAGATCTTGATGCTGCCAAACTATTGGTAATGTCACACCTACGTTTTGTCGTACATATTGCACGTAGCTATGCAGGTTACGGATTGCCACAAGGCGATCTTATTCAAGAAGGTAACCTTGGATTAATGAAAGCGGTCAAACGCTTCGATCCAAATATGGGTGTTCGCTTAGTTTCTTTTGCAGTGCACTGGATTAAAGCCGAAATACATGAATATGTGATTCGTAACTGGCGTATTGTCAAAATCGCAACGACCAAAGCACAACGTAAATTATTTTTTAATTTACGTAGTCTTAAAAAATCAAGCAAACGACTCACATTGGAAGAAGCGAAATCAATTGCCAATGATTTGAATGTAACACCAGAGCAAGTGCTCGAAATGGAAGGTCGCTTAACCGCTTATGATGCTGCTTTTGAAGCTCAAGGCGATGATGATGACGATACCTTGCACGATGTAGGTGTAAGAGGTTTCAACACCCATGAACTGCATGGCGATCTTCAAGAGCTCAAACACCAGAACGCCGATGAGGATGCCGCTCAGCGATGCCCCCGTCAGCGCACGCGCGGCATCCAGGTCGATTCGATCCGGCAGCGGCGGCAGCCACGGCCGTCGTGCGAGTCGGAGGCTCGCCGCCCTCTCGCGCACGGCACCGATCGTGTCCGGAGGGCACAGGGCGATGCGTGCGCGGCGCGGGGAGCTGTCGGCCGCTCGCCGGATGAGCGCGACGCCGCGCGCCCCCGTCGTGCCCGCCAGTCGCACGGCGTCGTCGTGCCCGAGGATCGTGCGCGAGTCAGCGGCATCCGTCACCCGGAACGCGATGCGCAGCGGAGCGTTCGCGAGCACACCGTCGCGGAAGGCGCCCGCTGCGCGCTGCGACGCGAGGACGAGGTGCATGCCGAGTGCGCGCACACGCGCGGCGATGTCGGCGAA
PROTEIN sequence
Length: 359
MTTDSSNQLMPLSLSAPGVNLGAYISTVNQIPILTAEQEKELAERYYYDQDLDAAKLLVMSHLRFVVHIARSYAGYGLPQGDLIQEGNLGLMKAVKRFDPNMGVRLVSFAVHWIKAEIHEYVIRNWRIVKIATTKAQRKLFFNLRSLKKSSKRLTLEEAKSIANDLNVTPEQVLEMEGRLTAYDAAFEAQGDDDDDTLHDVGVRGFNTHELHGDLQELKHQNADEDAAQRCPRQRTRGIQVDSIRQRRQPRPSCESEARRPLAHGTDRVRRAQGDACAARGAVGRSPDERDAARPRRARQSHGVVVPEDRARVSGIRHPERDAQRSVREHTVAEGARCALRREDEVHAECAHTRGDVGE