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SCNpilot_BF_INOC_scaffold_22754_1

Organism: SCNpilot_BF_INOC_Pseudomonadales_partialdouble_39_4

near complete RP 49 / 55 MC: 9 BSCG 43 / 51 MC: 5 ASCG 12 / 38 MC: 3
Location: 3..572

Top 3 Functional Annotations

Value Algorithm Source
Regulatory protein GntR HTH n=1 Tax=Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290) RepID=C6XY14_PEDHD similarity UNIREF
DB: UNIREF100
  • Identity: 70.4
  • Coverage: 189.0
  • Bit_score: 264
  • Evalue 1.20e-67
GntR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 70.4
  • Coverage: 189.0
  • Bit_score: 264
  • Evalue 3.30e-68
Regulatory protein GntR HTH {ECO:0000313|EMBL:ACU04432.1}; TaxID=485917 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter he similarity UNIPROT
DB: UniProtKB
  • Identity: 70.4
  • Coverage: 189.0
  • Bit_score: 264
  • Evalue 1.60e-67

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Taxonomy

Pedobacter heparinus → Pedobacter → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 570
CCTAAAGAACTAGAACTTGCAGAAGCCCTTGGAGTAAGTAGAAATGTTGTCAGAGAGGCTTTAAGCCGTTTGAGAATGTTAGGCATGGTTTCGACTAAAAAGAAAATTGGTATGATCCTCACACGCCCTGACATCCTGGGATCTTTTGAACGGGTATTGGATCCCTTGATTATTGACGAAAGTACTTTACAGGATATTTACGAATTGAGACTTACATTGGAAGTGGGGCTGGCAGATATTTTATACCTTAGAAAAACTGAAAAGGATATTGACGAACTAGAGAAGATTGCAAAAAGTCAAAAATCTACCTATGGAAGGCATGCCTTCCGTATAAAAAATGAAATTGCTTTTCATGGGAAAATATACCAAATGACAGGTAACGACACTTTGCAGAGATTTCAAAATATGTTATTGCCGGTTTTTGGCCATATAGTCAAGTTAGAAAAAGAACTTCTAATTGGTACAGTTACCCATCTTGATCTCGTTAATATATTAAGAAATGGCTCTAAAGAAGAATTTCGACAAGGGATGCTGGCCCATTTGGAATATCATTTTGCCAATTTAAAATAA
PROTEIN sequence
Length: 190
PKELELAEALGVSRNVVREALSRLRMLGMVSTKKKIGMILTRPDILGSFERVLDPLIIDESTLQDIYELRLTLEVGLADILYLRKTEKDIDELEKIAKSQKSTYGRHAFRIKNEIAFHGKIYQMTGNDTLQRFQNMLLPVFGHIVKLEKELLIGTVTHLDLVNILRNGSKEEFRQGMLAHLEYHFANLK*