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SCNpilot_BF_INOC_scaffold_34849_1

Organism: SCNpilot_BF_INOC_Pseudomonadales_partialdouble_39_4

near complete RP 49 / 55 MC: 9 BSCG 43 / 51 MC: 5 ASCG 12 / 38 MC: 3
Location: comp(3..1181)

Top 3 Functional Annotations

Value Algorithm Source
Ribonuclease R {ECO:0000256|HAMAP-Rule:MF_01895}; Short=RNase R {ECO:0000256|HAMAP-Rule:MF_01895};; EC=3.1.13.1 {ECO:0000256|HAMAP-Rule:MF_01895};; TaxID=1217713 species="Bacteria; Proteobacteria; Gam similarity UNIPROT
DB: UniProtKB
  • Identity: 99.5
  • Coverage: 393.0
  • Bit_score: 785
  • Evalue 2.60e-224
Ribonuclease R n=2 Tax=Acinetobacter gyllenbergii RepID=S3PLK8_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 99.5
  • Coverage: 393.0
  • Bit_score: 785
  • Evalue 1.80e-224
rnr; exoribonuclease R similarity KEGG
DB: KEGG
  • Identity: 90.6
  • Coverage: 393.0
  • Bit_score: 724
  • Evalue 1.40e-206

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Taxonomy

Acinetobacter sp. NIPH 809 → Acinetobacter → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1179
TACTTTATTCAGCCGAGCAATCCGAATCAGCATCAACCGATTACCCTCGAAAAAGAATTAATTCAACACGCCAATGCCAAAGTGGGCGCTATGCTGCGTGTTGCGATTGATGACTATCCGACCCGCGAAGAGCTGGCGACAGGTCACATCGTTCAATCGATGGCAGACAAAGCCGATACCGAGATTATTATTCCACAGACCATCTTAGAGTTTGGTCTACCTTATGAATTCCCTGAGGCCGTCATTAAAGAAGCTGAAAGTTTTAAAGAACCTTCGGCGAAAGATCTTAAAGGCCGTGTCGATTTACGGGACTTGCCATTGGTCACCATTGATGGTGAAGATGCGCGAGACTTTGACGATGCCGTATTCGCAGAGAAACGCGCAGGCGGTGGTTACCGTGTCGTGGTCGCGATTGCAGATGTAAGCCATTATGTTCGTTTAGATTCACCTTTAAATGAGGAAGCTGAAGAACGTGGTACATCGGTTTATTTCCCACACTTTGTTTTGCCAATGCTGCCAGAAGCATTGTCGAATGGATTGTGTTCTCTCAATCCACATGTTGACCGTCTGTGTATGGTCTGCGATTTAAAACTGTCACGTGCAGGTAAAGTCACAGGTTATGAGTTCTACCCTGCCGTTATGCATTCAAAGGCACGTTTGACCTATACTCAAGTAGGACAATATTTTGAGGGGGCAACCCATGCCATCCCTGAAGATAAGAGCATTCATAAATCACTGAATACCTTATTCCAACTCTATCAAACGCTAAAAGAATTGCGCGCCAAACGTCATGCAATGGAATTTGAAACCATTGAAACCTACATGACCTTTGATGAGTTAGGCGGGATTAAAGAAATCTTGCCACGTACTCGTAATGATGCGCATAAACTGATTGAAGAATGCATGTTATTGGCGAACGTTGCCGCAGCTGAATACTCATTAGAACATGATATTCCAATGTTGTATCGTGTTCATGAAGCGCCAGAATTCTCACGTATTCAAAAAGTCCGTGATTTCGTCAAATTACTCGGTTTGCCATTCCCAGAGCAACCAACCCAAGCTGATTACCAAGCCGTGATTGAAGCGACCAAAGATCGTTTAGATGCGCCAAGTATCCATGCGGTGCTGTTACGTTCAATGATGCAAGCCTATTATGGTGCGAACAATGCTGGACATTAC
PROTEIN sequence
Length: 393
YFIQPSNPNQHQPITLEKELIQHANAKVGAMLRVAIDDYPTREELATGHIVQSMADKADTEIIIPQTILEFGLPYEFPEAVIKEAESFKEPSAKDLKGRVDLRDLPLVTIDGEDARDFDDAVFAEKRAGGGYRVVVAIADVSHYVRLDSPLNEEAEERGTSVYFPHFVLPMLPEALSNGLCSLNPHVDRLCMVCDLKLSRAGKVTGYEFYPAVMHSKARLTYTQVGQYFEGATHAIPEDKSIHKSLNTLFQLYQTLKELRAKRHAMEFETIETYMTFDELGGIKEILPRTRNDAHKLIEECMLLANVAAAEYSLEHDIPMLYRVHEAPEFSRIQKVRDFVKLLGLPFPEQPTQADYQAVIEATKDRLDAPSIHAVLLRSMMQAYYGANNAGHY