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SCNpilot_BF_INOC_scaffold_39748_4

Organism: SCNpilot_BF_INOC_Pseudomonadales_partialdouble_39_4

near complete RP 49 / 55 MC: 9 BSCG 43 / 51 MC: 5 ASCG 12 / 38 MC: 3
Location: comp(1607..2116)

Top 3 Functional Annotations

Value Algorithm Source
Ribosomal RNA small subunit methyltransferase D {ECO:0000256|PIRNR:PIRNR004553}; EC=2.1.1.171 {ECO:0000256|PIRNR:PIRNR004553};; TaxID=1217711 species="Bacteria; Proteobacteria; Gammaproteobacteria; Ps similarity UNIPROT
DB: UniProtKB
  • Identity: 95.3
  • Coverage: 169.0
  • Bit_score: 322
  • Evalue 4.50e-85
RsmD family RNA methyltransferase n=1 Tax=Acinetobacter sp. NIPH 236 RepID=N8QWI4_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 95.3
  • Coverage: 169.0
  • Bit_score: 322
  • Evalue 3.20e-85
rsmD; putative methyltransferase similarity KEGG
DB: KEGG
  • Identity: 76.0
  • Coverage: 167.0
  • Bit_score: 266
  • Evalue 5.90e-69

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Taxonomy

Acinetobacter sp. NIPH 236 → Acinetobacter → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 510
CGTAGAACGCTACCATTCGCTAGCATTGAGGGTTTACGTCCGACACCAGATCGAGTAAGAGAAACATTATTCAACTGGCTCATGTGGGATATACAAAATTCACAAGTTTTAGATTTATGTAGTGGTTCTGGTGCACTAGCCTTTGAAGCTTTATCACGCGGCGCTGCAAAAGTCGTCATGATCGAACCAGATCCAATTCAAGCACGTTTTTTAAAAGAAAATATCCAACTCCTAAAAGCAGATAATTGTCAGCTACTTACTTTAACTGCACAACAAGCATTAAAGAAGCTAAATACTCCTTTTGATGTGATCTTTTTAGACCCACCCTATGGCTTAGATCTATGGCAAGAACTTGCTGTATTAGCCGATCCAATCATTGCCGAAAATGCGTTTATTTATGTAGAAGCGGATCGAGAATTATCTCAATTGCAACTCCCATCAACGTGGCAAAAGATCAAAGAAACCAAAGCTGGGATTGTGAGAGCTGGGCTGTATCAAAAACATGCTTAG
PROTEIN sequence
Length: 170
RRTLPFASIEGLRPTPDRVRETLFNWLMWDIQNSQVLDLCSGSGALAFEALSRGAAKVVMIEPDPIQARFLKENIQLLKADNCQLLTLTAQQALKKLNTPFDVIFLDPPYGLDLWQELAVLADPIIAENAFIYVEADRELSQLQLPSTWQKIKETKAGIVRAGLYQKHA*