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SCNpilot_BF_INOC_scaffold_41906_1

Organism: SCNpilot_BF_INOC_Pseudomonadales_partialdouble_39_4

near complete RP 49 / 55 MC: 9 BSCG 43 / 51 MC: 5 ASCG 12 / 38 MC: 3
Location: comp(3..530)

Top 3 Functional Annotations

Value Algorithm Source
RNA-splicing ligase RtcB {ECO:0000256|RuleBase:RU371113}; EC=6.5.1.- {ECO:0000256|RuleBase:RU371113};; TaxID=1217711 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Moraxellac similarity UNIPROT
DB: UniProtKB
  • Identity: 98.3
  • Coverage: 176.0
  • Bit_score: 347
  • Evalue 1.40e-92
RNA-splicing ligase RtcB n=1 Tax=Acinetobacter sp. NIPH 236 RepID=N8QW84_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 98.3
  • Coverage: 176.0
  • Bit_score: 347
  • Evalue 9.70e-93
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 90.3
  • Coverage: 176.0
  • Bit_score: 323
  • Evalue 4.30e-86

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Taxonomy

Acinetobacter sp. NIPH 236 → Acinetobacter → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 528
ATGGGCATACAAAAAATACTTAATGCTAATGCTGAATATGGTGTTCCAGTAAAAATATTCACCAATGATATTGATAGCGAAAGCATTGAACAGCTAAAAAAAATGGCGCAACTGCAATTTGTGTATTCACATATTGCTGTTATGCCTGATGTGCATGTAGGCAAAGGTGCAACTGTTGGCAGTGTCATTCCCACAAAAAATGCAATTATTCCCGCTGCTGTCGGTGTCGACATCGGTTGTGGCATGAATGCTATTCGACTCAATCTCAAAGCATCACAGTTGCCAAATAATCTCGCACCTTTACGTCATGCAATTGAACGTAAAGTCCCTGTAGGATTTGAGTTACATAAACAAATTAAGGCGAAAGCCTCAAATATTATTCCACTGGAAAAACGCTTGCAGCCGATCATTAAAAAGCACCCCGGCTTAGTTCGGATGCTCAGAAAGTTTGATGCAACATGGCAAAAACAACTCGGTACCTTGGGCGGTGGCAATCACTTTATCGAACTCTGTTTGGATGAAAATCAG
PROTEIN sequence
Length: 176
MGIQKILNANAEYGVPVKIFTNDIDSESIEQLKKMAQLQFVYSHIAVMPDVHVGKGATVGSVIPTKNAIIPAAVGVDIGCGMNAIRLNLKASQLPNNLAPLRHAIERKVPVGFELHKQIKAKASNIIPLEKRLQPIIKKHPGLVRMLRKFDATWQKQLGTLGGGNHFIELCLDENQ