ggKbase home page

SCNpilot_BF_INOC_scaffold_17286_3

Organism: SCNpilot_BF_INOC_Thiobacillus_strain3_64_20

partial RP 19 / 55 MC: 1 BSCG 17 / 51 ASCG 3 / 38
Location: comp(1504..1911)

Top 3 Functional Annotations

Value Algorithm Source
ribosomal large subunit pseudouridine synthase E (EC:5.4.99.-); K06181 23S rRNA pseudouridine2457 synthase [EC:5.4.99.20] Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 88.1
  • Coverage: 135.0
  • Bit_score: 249
  • Evalue 3.00e-63
ribosomal large subunit pseudouridine synthase E (EC:5.4.99.-) similarity KEGG
DB: KEGG
  • Identity: 85.2
  • Coverage: 135.0
  • Bit_score: 241
  • Evalue 1.20e-61
ribosomal large subunit pseudouridine synthase E n=1 Tax=Thiobacillus thioparus RepID=UPI000367E822 similarity UNIREF
DB: UNIREF100
  • Identity: 89.6
  • Coverage: 135.0
  • Bit_score: 252
  • Evalue 1.90e-64

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RIFOXYA1_FULL_Hydrogenophilales_63_33_curated → Hydrogenophilales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 408
GAAGGCCTGCTGATTTTAACCGATGACGGCGCGACCCAGAGCCGCATCGCCGATCCCCGGCACAAGCTGCCCAAAACCTACTGGGCGCAGGTCGAGGGGGCTCCCGACGATGCCGCGCTGGAGCCGCTGCGCCACGGCGTCGATCTCGGCGACTTCGTCACCCGTCCGGCACACGCGCGGCTCATCGACGAGCCTGCCGGCCTGTGGCCACGCAACCCGCCGATCCGCTTTCGCGCCAGCATCCCAACCCGCTGGATCGAACTGACGATCAGCGAGGGCAAGAACCGTCAGGTGCGGCGGATGACGGCGAAGATCGGCTTTCCGACGCTGCGCCTGATCCGCGCCGCCGTCGGCGAATGGACCCTGGGCGTCTTGCAGCCCGGAGAATGGAAGGAACAGCATGTCTGA
PROTEIN sequence
Length: 136
EGLLILTDDGATQSRIADPRHKLPKTYWAQVEGAPDDAALEPLRHGVDLGDFVTRPAHARLIDEPAGLWPRNPPIRFRASIPTRWIELTISEGKNRQVRRMTAKIGFPTLRLIRAAVGEWTLGVLQPGEWKEQHV*