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SCNpilot_BF_INOC_scaffold_17626_6

Organism: SCNpilot_BF_INOC_Thiobacillus_strain3_64_20

partial RP 19 / 55 MC: 1 BSCG 17 / 51 ASCG 3 / 38
Location: comp(2424..3041)

Top 3 Functional Annotations

Value Algorithm Source
50S ribosomal protein L4 id=1308461 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb similarity UNIREF
DB: UNIREF100
  • Identity: 97.6
  • Coverage: 206.0
  • Bit_score: 401
  • Evalue 5.10e-109
rplD; 50S ribosomal protein L4; K02926 large subunit ribosomal protein L4 Tax=GWE1_Thiobacillus_62_9_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 97.6
  • Coverage: 205.0
  • Bit_score: 401
  • Evalue 7.10e-109
rplD; 50S ribosomal protein L4 similarity KEGG
DB: KEGG
  • Identity: 93.2
  • Coverage: 205.0
  • Bit_score: 389
  • Evalue 5.60e-106

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Taxonomy

GWE1_Thiobacillus_62_9_curated → Hydrogenophilales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 618
ATGGATTTGGCGGTCATTAACGAACTGGGTCAGCAGGTGACCAGCGTCGCGGCTTCCGACGAGACCTTTGGTCGCGATTATAACGAGGCGCTGGTGCATCAGGTGGTGACGGCGTTCCAGGCGAACGCGCGCAGCGGTAACCGCGCGCAGTTGACGCGTGCCGAGGTGACTGCCTCCACGCACAAGCCGTGGCGTCAAAAGGGTACCGGTCGCGCGCGTTCCGGCCGTACCTCGAGTCCGATCTGGCGCGGGGGTGGTGTCACGTTCCCGAACAAGCCGAACGAAAACTTCACCCACAAGGTGAACCGCAAGATGTATCGCGCGGGTTTGGCGACCATCCTGTCGCAGCTGGCGCGCGAGGGCAAGCTCAAGGTGGTGGAGAGTCTGGGTGTCGATTCGCCCAAGACCAAGCTGCTCGCCGGCAAACTTAAGTCGATGGGTTATGGCAAGGTCATGATCATTGCGGACAGCGTTGATGACAACCTGTGGCTGTCGTCGCGCAACCTGCCGAACGTTTATGTGGTCGAGCCGCATCAGGCGGATCCGTGGAGCCTGGTTAAATTCGGTAACGTGCTGATCACCAAGGCGGCGGTCAAGCAGTTTGAGGAGATGGTGTAA
PROTEIN sequence
Length: 206
MDLAVINELGQQVTSVAASDETFGRDYNEALVHQVVTAFQANARSGNRAQLTRAEVTASTHKPWRQKGTGRARSGRTSSPIWRGGGVTFPNKPNENFTHKVNRKMYRAGLATILSQLAREGKLKVVESLGVDSPKTKLLAGKLKSMGYGKVMIIADSVDDNLWLSSRNLPNVYVVEPHQADPWSLVKFGNVLITKAAVKQFEEMV*