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SCNpilot_BF_INOC_scaffold_28907_4

Organism: SCNpilot_BF_INOC_Thiobacillus_strain3_64_20

partial RP 19 / 55 MC: 1 BSCG 17 / 51 ASCG 3 / 38
Location: comp(3158..3457)

Top 3 Functional Annotations

Value Algorithm Source
efflux transporter, rnd family, mfp subunit; K15727 cobalt-zinc-cadmium resistance protein CzcB Tax=GWE1_Thiobacillus_62_9_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 99.0
  • Bit_score: 198
  • Evalue 4.40e-48
Efflux transporter, RND family, MFP subunit id=1341263 bin=GWE1_T_denit_62_9 species=Alicycliphilus denitrificans genus=Alicycliphilus taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb similarity UNIREF
DB: UNIREF100
  • Identity: 99.0
  • Coverage: 100.0
  • Bit_score: 197
  • Evalue 5.40e-48
RND family efflux transporter MFP subunit similarity KEGG
DB: KEGG
  • Identity: 66.7
  • Coverage: 99.0
  • Bit_score: 144
  • Evalue 2.00e-32

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Taxonomy

GWE1_Thiobacillus_62_9_curated → Hydrogenophilales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 300
TTGTCGAACCCGCAGATGGCCTGGCGTCCTGGGTTGTTCATCAATGTCGAGATCGTCTCCAAGGAAACCCCTGTGCCGGTCGCCGTGTCGTTGGACGCTGTCCAGAATGTCGACGAAAAGCCCACGATCTTTGTCCGCGTGCCGGGGGGCTTTATTGCCCAACCCGTCACCATCGGCCTGTCCGACGGCAAGACTATTGAGGTCGTAAAAGGGCTGAAGCCGGGAACCCAATACGCCGCCGCCGGCAGCTTCACCATCAAGTCGGAGCTGGGTAAAAGCAGCGCCGAACACGCGCATTGA
PROTEIN sequence
Length: 100
LSNPQMAWRPGLFINVEIVSKETPVPVAVSLDAVQNVDEKPTIFVRVPGGFIAQPVTIGLSDGKTIEVVKGLKPGTQYAAAGSFTIKSELGKSSAEHAH*