ggKbase home page

SCNpilot_BF_INOC_scaffold_34406_1

Organism: SCNpilot_BF_INOC_Thiobacillus_strain3_64_20

partial RP 19 / 55 MC: 1 BSCG 17 / 51 ASCG 3 / 38
Location: comp(2..817)

Top 3 Functional Annotations

Value Algorithm Source
protease n=1 Tax=Thiobacillus denitrificans RepID=UPI00036E3321 similarity UNIREF
DB: UNIREF100
  • Identity: 96.7
  • Coverage: 272.0
  • Bit_score: 524
  • Evalue 5.30e-146
collagenase similarity KEGG
DB: KEGG
  • Identity: 90.8
  • Coverage: 272.0
  • Bit_score: 502
  • Evalue 1.00e-139
Probable collagenase {ECO:0000313|EMBL:AAZ96986.1}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus deni similarity UNIPROT
DB: UniProtKB
  • Identity: 90.8
  • Coverage: 272.0
  • Bit_score: 502
  • Evalue 5.10e-139

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Thiobacillus denitrificans → Thiobacillus → Hydrogenophilales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 816
GTGGAACCCCATCAACTCGAATTGCTTGCGCCCGCGCGCGATGCCGACATCGGCATCGCGGCCGTCGACCACGGCGCCGATGCGGTATACATCGGCGGCCCGTCGTTCGGCGCGCGCGCCGCAGCCTGCAACGAGATCGCCGATCTCGCGCGGCTGGTCGACCACGCGCACCGCTTCAACGCGCGCGTGTTCGTCACCCTCAACACCATCCTCGCCGACAACGAACTCGAACCGGCGCGCCGGCAGATCCGGCAGCTTTACGACGCCGGCGTCGACGCGCTGATCATCCAGGACATGGGCCTGCTGGAACTCGACCTGCCGCCGATCCAGCTACACGCCAGCACCCAGACCGACATCCGCACCCCGCAAAAGGCCCGCTTCCTGCAGGACGTCGGGCTGTCGCAAATCGTGCTGGCGCGCGAACTCGATCTGAAACAGATCGCCGCCATCCGCGCCGCCACGCGGCCGGAAACCACCCTGGAGTTTTTCGTCCACGGCGCGCTGTGCGTCGCCTACAGCGGCCAGTGCTACATCAGCCACGCCCACACCGGGCGCAGCGCCAACCGCGGCGACTGCTCGCAGGCCTGCCGCCTGCCGTACCAGGTCACCGATATGGAAGGGCGCATCGTCGCGCACGACAAACACGTGCTGTCGATGAAGGACAACAACCAGAGCGCCAATCTCGAAGCGCTGATCGAAGCCGGCATCCGCAGCTTCAAGATCGAGGGCCGCTACAAGGACATGGGCTACGTGAAGAACATCACCGCCCATTACCGCACGCTGCTCGACCAGATCATCGAACGCCGCCCGGAATTC
PROTEIN sequence
Length: 272
VEPHQLELLAPARDADIGIAAVDHGADAVYIGGPSFGARAAACNEIADLARLVDHAHRFNARVFVTLNTILADNELEPARRQIRQLYDAGVDALIIQDMGLLELDLPPIQLHASTQTDIRTPQKARFLQDVGLSQIVLARELDLKQIAAIRAATRPETTLEFFVHGALCVAYSGQCYISHAHTGRSANRGDCSQACRLPYQVTDMEGRIVAHDKHVLSMKDNNQSANLEALIEAGIRSFKIEGRYKDMGYVKNITAHYRTLLDQIIERRPEF