ggKbase home page

SCNpilot_BF_INOC_scaffold_37095_2

Organism: SCNpilot_BF_INOC_Thiobacillus_strain3_64_20

partial RP 19 / 55 MC: 1 BSCG 17 / 51 ASCG 3 / 38
Location: comp(589..1113)

Top 3 Functional Annotations

Value Algorithm Source
DNA-(apurinic or apyrimidinic site) lyase / formamidopyrimidine-DNA glycosylase (EC:3.2.2.23 4.2.99.18); K10563 formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18] Tax=GWE1_Thiobacillus_62_9_c similarity UNIPROT
DB: UniProtKB
  • Identity: 90.8
  • Coverage: 174.0
  • Bit_score: 323
  • Evalue 2.10e-85
DNA-(apurinic or apyrimidinic site) lyase / formamidopyrimidine-DNA glycosylase (EC:3.2.2.23 4.2.99.18) similarity KEGG
DB: KEGG
  • Identity: 83.8
  • Coverage: 173.0
  • Bit_score: 285
  • Evalue 1.30e-74
5-hydroxymethyluracil DNA glycosylase n=1 Tax=Thiobacillus denitrificans RepID=UPI00036718D6 similarity UNIREF
DB: UNIREF100
  • Identity: 97.7
  • Coverage: 174.0
  • Bit_score: 346
  • Evalue 1.30e-92

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

GWE1_Thiobacillus_62_9_curated → Hydrogenophilales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 525
CTGTTCGACGACGGCACCACGCTGCGGCTGCGCGACCCGCGCCGCTTCGGCGCGGTGCTGTGGACCCACGACGCGGCACGGCATCCGCTGCTGGCCCATCTCGGGCCGGAACCGCTCACTCCGGCGTTCGACGCGGCCTACCTGCACGCGCAGTGCCGACGCCGCGGCACCGCCATCAAGCAGGTCATCATGGATGCCGGGGTGGTGGTCGGCGTCGGCAACATCTACGCGTCCGAGTCGCTGTTTCACGCCGGCATCCGTCCCGCCACCGCCGCGCGCCGCCTCAGCCGCCCCGCCTGCGCGCGGCTGGCGGCGGCGATCAAGCAGGTGCTGACGGCGGCCATCGCCGCGGGCGGCAGTTCGCTGCGCGATTACGTTCACAGCAGCGGCGAACTCGGCTATTTCCAGCTGCAAACACGGGTCTACGACCGCGCGGGCCAGCCATGCAGGGTCTGCGCCACCCCGATACGCCGCATCGTGCAGGGCCAGCGTGCGAGTTTCTACTGTCCCGGCTGCCAGCATTGA
PROTEIN sequence
Length: 175
LFDDGTTLRLRDPRRFGAVLWTHDAARHPLLAHLGPEPLTPAFDAAYLHAQCRRRGTAIKQVIMDAGVVVGVGNIYASESLFHAGIRPATAARRLSRPACARLAAAIKQVLTAAIAAGGSSLRDYVHSSGELGYFQLQTRVYDRAGQPCRVCATPIRRIVQGQRASFYCPGCQH*