ggKbase home page

SCNpilot_BF_INOC_scaffold_5045_2

Organism: SCNpilot_BF_INOC_Thiobacillus_strain3_64_20

partial RP 19 / 55 MC: 1 BSCG 17 / 51 ASCG 3 / 38
Location: 1374..2669

Top 3 Functional Annotations

Value Algorithm Source
Efflux transporter, RND family, MFP subunit n=1 Tax=Geobacter daltonii (strain DSM 22248 / JCM 15807 / FRC-32) RepID=B9M672_GEODF similarity UNIREF
DB: UNIREF100
  • Identity: 75.1
  • Coverage: 426.0
  • Bit_score: 614
  • Evalue 1.00e-172
RND family efflux transporter MFP subunit similarity KEGG
DB: KEGG
  • Identity: 75.1
  • Coverage: 426.0
  • Bit_score: 614
  • Evalue 3.00e-173
Efflux pump, RND family, membrane fusion protein {ECO:0000313|EMBL:ACM21860.1}; TaxID=316067 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" so similarity UNIPROT
DB: UniProtKB
  • Identity: 75.1
  • Coverage: 426.0
  • Bit_score: 614
  • Evalue 1.50e-172

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Geobacter daltonii → Geobacter → Desulfuromonadales → Deltaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1296
ATGAACCCCTCCGACACTCCGCAAGCCAACCCGGCCGAAGCCCTGAAAAACCTCCTCGCCGCCCGGCCTGCCGGGCGGTTCCCGCGCCGCCGGCTGTGGCTGGCCGGCGCGGCGCTGGTGCTGATCGCGGCGGCGGGCCTGCTGGCTTACGGGCCCGCCGAGCAGGCGGCCGGGCCCCGTTACAAAACCGAGCCGGCCAGCGTCGGCGTTCTGGTGGTCAAGGTTTCCGCCACCGGCAACCTGCAGCCCACCAATCAGGTGGACGTGGGCAGCGAACTGTCCGGCATCGTCGACAAGGTGCTGGTCGACGACAACGACCGGGTGAAGAAGGGACAGGTTCTGGCCCGCCTGGACCTGTCCAAGCTGAACGACGCGGTGGCGAAATCGCGCGCCAACCTGGACTCGGCGCTGGCGCAGGTGCTGCAGGCGCAGGCCACGGTGGCGGAAGCGCACGCCGCGCTGGCGCGCTTCCGGCAGGTGGCGCAGCTGTCCGGCGGCAAGGTGCCGTCCAGAAGCGAAATGGACAGCGCCGAGGCAAATCTGAAACGGGCCGAGGCCAATGAAGCCAGCGCCCGTGCGAGCGTCACCCAGGCCCGCGCCACGCTGCAGTCGGATCAGACCAACCTGGCCAAGGCCAGCATCCGTTCGCCCATCGACGGCGTGGTGCTGACCCGCAAGGTGGAGCCGGGCCAGACGGTGGCCGCCTCCTTCCAGGCCCCGGTGCTGTTCACCCTCGCCGAGGACCTCGCCAAGATGGAGCTGCAGGTGGACGTGGACGAAGCCGACGTCGGCCAGGTGAAAGTCGGCCAGAAAGCCAGCTTCAGCGTCGATGCCTGGCCTGGCCGCCGCTACGCCGCCGTCATCACCCGGGTGAGCTACGGTTCCCAGGTCAAGGACGGCGTGGTGTCCTACCTGGCCGTGCTCGAAGTGGGCAACGACGACCTCAGCCTGCGTCCCGGCATGACCGGCACCGCAGAGATCACCACCCTGACCCGGGAGCGTGCCCTGCTGGTGCCGAACGCGGCGCTGCGCTTCACTCCTGCGGCGGCCGCTGCAGTGCAGAAAAAATCCGGCAGCGCTCTGACGGGCATCCTGATGCCGCGTCCGCCCAGGCAGACGCCGAAGGCCCAGGCGGCCGATGGCGGCACGCCGCGGGTGTGGACGCTGCGCGACGGCCAGGCCGTGCCGCTGGAAGTGAAAACCGGCGCCAGCAACGGCCGGGTGACCGAGATCGTCGGCGGCGAACTGCGCGCCGGCATGGAGGTGATCACCGAGGCGGCGGACAGGCAGCCATGA
PROTEIN sequence
Length: 432
MNPSDTPQANPAEALKNLLAARPAGRFPRRRLWLAGAALVLIAAAGLLAYGPAEQAAGPRYKTEPASVGVLVVKVSATGNLQPTNQVDVGSELSGIVDKVLVDDNDRVKKGQVLARLDLSKLNDAVAKSRANLDSALAQVLQAQATVAEAHAALARFRQVAQLSGGKVPSRSEMDSAEANLKRAEANEASARASVTQARATLQSDQTNLAKASIRSPIDGVVLTRKVEPGQTVAASFQAPVLFTLAEDLAKMELQVDVDEADVGQVKVGQKASFSVDAWPGRRYAAVITRVSYGSQVKDGVVSYLAVLEVGNDDLSLRPGMTGTAEITTLTRERALLVPNAALRFTPAAAAAVQKKSGSALTGILMPRPPRQTPKAQAADGGTPRVWTLRDGQAVPLEVKTGASNGRVTEIVGGELRAGMEVITEAADRQP*