ggKbase home page

SCNpilot_BF_INOC_scaffold_217

Search features with annotation key words

Displaying items 211-240 of 398 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_BF_INOC_scaffold_217_211
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(280521..282065)
DNA (1545bp) protein (515aa)
PKD domain containing protein id=1795444 bin=GWD2_Bacteroidales_45_23 species=Bacteroides coprosuis genus=Bacteroides taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWD2_Bacteroidales_45_23 organism_group=Bacteroidetes
hypothetical protein Tax=GWC2_Bacteroidetes_46_850_curated
PKD domain containing protein
SCNpilot_BF_INOC_scaffold_217_212
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(282236..283831)
DNA (1596bp) protein (532aa)
RagB/SusD domain-containing protein id=1795443 bin=GWD2_Bacteroidales_45_23 species=Bacteroides coprosuis genus=Bacteroides taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWD2_Bacteroidales_45_23 organism_group=Bacteroidetes
ragb/susd domain protein Tax=GWC2_Bacteroidetes_46_850_curated
RagB/SusD domain-containing protein
SCNpilot_BF_INOC_scaffold_217_213
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(283855..285540)
DNA (1686bp) protein (562aa)
TonB-dependent receptor plug domain protein id=4197157 bin=GWC2_Bacteroidetes_46_850 species=Bacteroides fluxus genus=Bacteroides taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWC2_Bacteroidetes_46_850 organism_group=Bacteroidetes
tonb-dependent receptor plug Tax=GWC2_Bacteroidetes_46_850_curated
TonB-dependent receptor plug domain protein
SCNpilot_BF_INOC_scaffold_217_214
Porphyromonadaceae bacterium ING2-E5B, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(285537..287303)
DNA (1767bp) protein (589aa)
TonB-dependent receptor plug domain protein
TonB-dependent receptor plug domain protein {ECO:0000313|EMBL:CEA16928.1}; TaxID=1562970 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; unclassified Porphyromonadace
TonB-dependent receptor plug domain protein id=1795442 bin=GWD2_Bacteroidales_45_23 species=Bacteroides fluxus genus=Bacteroides taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWD2_Bacteroidales_45_23 organism_group=Bacteroidetes
SCNpilot_BF_INOC_scaffold_217_215
Alistipes sp. CAG:435, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(287618..287893)
DNA (276bp) protein (92aa)
Uncharacterized protein n=1 Tax=Alistipes sp. CAG:435 RepID=R6YA63_9BACT
Uncharacterized protein {ECO:0000313|EMBL:CDD15337.1}; TaxID=1262695 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes
hypothetical protein
SCNpilot_BF_INOC_scaffold_217_216
unknown

Not on your lists

comp(287844..287966)
DNA (123bp) protein (41aa)

This feature has no annotations

SCNpilot_BF_INOC_scaffold_217_217
BJP_08E140C01_Bacteroidetes_41_49, Bacteroidetes, Bacteria

Not on your lists

comp(288128..288664)
DNA (537bp) protein (179aa)
Uncharacterized protein id=3992686 bin=GWF2_Bacteroidetes_40_14 species=unknown genus=Bacteroides taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_40_14 organism_group=Bacteroidetes
hypothetical protein
Tax=BJP_08E140C01_Bacteroidetes_41_49
SCNpilot_BF_INOC_scaffold_217_218
Porphyromonadaceae bacterium ING2-E5B, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(288779..289876)
DNA (1098bp) protein (366aa)
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI00038192C7
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CEA16929.1}; TaxID=1562970 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; unclassified Porphyromonadaceae.;" source="Porphy
SCNpilot_BF_INOC_scaffold_217_219
Chryseobacterium gleum, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(289975..291564)
DNA (1590bp) protein (530aa)
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI00038192C7
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EFK35171.1}; TaxID=525257 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium
SCNpilot_BF_INOC_scaffold_217_220
Flavobacterium hibernum, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(291567..292595)
DNA (1029bp) protein (343aa)
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI0003809035
Strain DSM 12611 Contig05, whole genome shotgun sequence {ECO:0000313|EMBL:KIO53937.1}; TaxID=37752 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacteriu
SCNpilot_BF_INOC_scaffold_217_221
Chryseobacterium taiwanense, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(292588..293400)
DNA (813bp) protein (271aa)
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI00036CFB95
Uncharacterized protein {ECO:0000313|EMBL:KIC63443.1}; TaxID=363331 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium
hypothetical protein
SCNpilot_BF_INOC_scaffold_217_222

Not on your lists

comp(293532..294104)
DNA (573bp) protein (191aa)
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI000361F527
Uncharacterized protein {ECO:0000313|EMBL:AGU11087.1}; TaxID=155900 species="unclassified sequences; environmental samples.;" source="uncultured organism.;"
hypothetical protein
SCNpilot_BF_INOC_scaffold_217_223
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(294840..295823)
DNA (984bp) protein (328aa)
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI00037E3C46
Fe2+-dicitrate sensor, membrane component Tax=GWC2_Bacteroidetes_46_850_curated
hypothetical protein
SCNpilot_BF_INOC_scaffold_217_224
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(296025..296603)
DNA (579bp) protein (193aa)
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI000379C97C
RNA polymerase sigma factor, sigma-70 family/RNA polymerase sigma-70 factor, Bacteroides expansion family 1 Tax=GWC2_Bacteroidetes_46_850_curated
RNA polymerase sigma-70 factor
SCNpilot_BF_INOC_scaffold_217_225
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(296685..297908)
DNA (1224bp) protein (408aa)
SufS subfamily cysteine desulfurase (EC:4.4.1.16); K11717 cysteine desulfurase / selenocysteine lyase [EC:2.8.1.7 4.4.1.16] Tax=GWC2_Bacteroidetes_46_850_curated
putative cysteine desulfurase (EC:2.8.1.7) rbh
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI000377533C
SCNpilot_BF_INOC_scaffold_217_226
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(298037..299377)
DNA (1341bp) protein (447aa)
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI00037A1770
ABC transporter; K09015 Fe-S cluster assembly protein SufD Tax=GWC2_Bacteroidetes_46_850_curated
hypothetical protein
SCNpilot_BF_INOC_scaffold_217_227
Porphyromonadaceae bacterium ING2-E5B, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(299399..300142)
DNA (744bp) protein (248aa)
transporter n=1 Tax=Proteiniphilum acetatigenes RepID=UPI000369CEFA
ycf16; putative ATP-dependent transporter ycf16
Putative ATP-dependent transporter ycf16 {ECO:0000313|EMBL:CEA16934.1}; TaxID=1562970 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; unclassified Porphyromonadaceae.
SCNpilot_BF_INOC_scaffold_217_228
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(300537..301298)
DNA (762bp) protein (254aa)
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI00036EEE45
ABC transporter ATP-binding protein; K02065 putative ABC transport system ATP-binding protein Tax=GWC2_Bacteroidetes_46_850_curated
ABC transporter ATP-binding protein
SCNpilot_BF_INOC_scaffold_217_229
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(301311..302060)
DNA (750bp) protein (250aa)
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI0003614692
ABC transporter permease; K02066 putative ABC transport system permease protein Tax=GWC2_Bacteroidetes_46_850_curated
hypothetical protein
SCNpilot_BF_INOC_scaffold_217_230
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(302136..303698)
DNA (1563bp) protein (521aa)
tRNA-processing RNAse BN (EC:3.1.-.-); K07058 membrane protein Tax=GWC2_Bacteroidetes_46_850_curated
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI00038276DC
hypothetical protein
SCNpilot_BF_INOC_scaffold_217_231
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

304005..304241
DNA (237bp) protein (79aa)
Uncharacterized protein {ECO:0000313|EMBL:BAD49498.1}; TaxID=295405 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis (strain YC
SCNpilot_BF_INOC_scaffold_217_232
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(304481..305335)
DNA (855bp) protein (285aa)
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI00035D3C34
response regulator receiver protein Tax=GWC2_Bacteroidetes_46_850_curated
response regulator receiver protein
SCNpilot_BF_INOC_scaffold_217_233
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

305730..306845
DNA (1116bp) protein (372aa)
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI00037F96E3
hypothetical protein Tax=GWC2_Bacteroidetes_46_850_curated
hypothetical protein
SCNpilot_BF_INOC_scaffold_217_234
Dysgonomonas gadei, Dysgonomonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

307162..308304
DNA (1143bp) protein (381aa)
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI0003724601
Uncharacterized protein {ECO:0000313|EMBL:EGK02292.1}; TaxID=742766 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Dysgonomonas.;" source="Dysgonomonas gadei ATCC BA
RND family efflux transporter MFP subunit
SCNpilot_BF_INOC_scaffold_217_235
Dysgonomonas gadei, Dysgonomonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

308306..311488
DNA (3183bp) protein (1061aa)
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI00036B14E7
Uncharacterized protein {ECO:0000313|EMBL:EGK02293.1}; TaxID=742766 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Dysgonomonas.;" source="Dysgonomonas gadei ATCC BA
hydrophobe/amphiphile efflux-1 family transporter
SCNpilot_BF_INOC_scaffold_217_236
Dysgonomonas gadei, Dysgonomonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

311475..312896
DNA (1422bp) protein (474aa)
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI0003648346
Uncharacterized protein {ECO:0000313|EMBL:EGK02294.1}; TaxID=742766 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Dysgonomonas.;" source="Dysgonomonas gadei ATCC BA
NodT family RND efflux system outer membrane lipoprotein
SCNpilot_BF_INOC_scaffold_217_237
Bacteroides sp. 1_1_14, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

313073..313399
DNA (327bp) protein (109aa)
Putative uncharacterized protein n=1 Tax=Bacteroides sp. 1_1_14 RepID=D7I9U1_9BACE
Putative uncharacterized protein {ECO:0000313|EMBL:EFI05420.1}; TaxID=469585 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 1_1_14
hypothetical protein
SCNpilot_BF_INOC_scaffold_217_238
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

313354..313998
DNA (645bp) protein (215aa)
Uncharacterized protein n=1 Tax=Parabacteroides distasonis CL09T03C24 RepID=K6AA05_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN20551.1}; TaxID=999417 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distaso
hypothetical protein
SCNpilot_BF_INOC_scaffold_217_239
Porphyromonadaceae bacterium ING2-E5B, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

314102..314665
DNA (564bp) protein (188aa)
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI000363423F
putative ECF-type RNA polymerase sigma factor
Putative ECF-type RNA polymerase sigma factor {ECO:0000313|EMBL:CEA15421.1}; TaxID=1562970 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; unclassified Porphyromonada
SCNpilot_BF_INOC_scaffold_217_240
Porphyromonadaceae bacterium ING2-E5B, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

314739..315710
DNA (972bp) protein (324aa)
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI000382305E
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:CEA15420.1}; TaxID=1562970 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; unclassified Porphyromonadaceae.;" source="Porphy
Displaying items 211-240 of 398 in total

View Taxonomy