ggKbase home page

SCNpilot_BF_INOC_scaffold_219

Search features with annotation key words

Displaying items 121-150 of 264 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_BF_INOC_scaffold_219_121
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


152728..153282
DNA (555bp) protein (185aa)
50S ribosomal protein L6 n=1 Tax=Proteiniphilum acetatigenes RepID=UPI000361BFEB
rplF; 50S ribosomal protein L6; K02933 large subunit ribosomal protein L6 Tax=GWC2_Bacteroidetes_46_850_curated
rplF; 50S ribosomal protein L6 rbh
SCNpilot_BF_INOC_scaffold_219_122
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


153302..153646
DNA (345bp) protein (115aa)
50S ribosomal protein L18 n=1 Tax=Proteiniphilum acetatigenes RepID=UPI0003736AFB
rplR; 50S ribosomal protein L18; K02881 large subunit ribosomal protein L18 Tax=GWC2_Bacteroidetes_46_850_curated
50S ribosomal protein L18
SCNpilot_BF_INOC_scaffold_219_123
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


153652..154170
DNA (519bp) protein (173aa)
30S ribosomal protein S5 n=1 Tax=Proteiniphilum acetatigenes RepID=UPI00035D70AA
rpsE; 30S ribosomal protein S5; K02988 small subunit ribosomal protein S5 Tax=GWC2_Bacteroidetes_46_850_curated
rpsE; 30S ribosomal protein S5
SCNpilot_BF_INOC_scaffold_219_124
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


154185..154364
DNA (180bp) protein (60aa)
50S ribosomal protein L30 n=1 Tax=Proteiniphilum acetatigenes RepID=UPI00036ED4F3
rpmD; 50S ribosomal protein L30; K02907 large subunit ribosomal protein L30 Tax=GWC2_Bacteroidetes_46_850_curated
hypothetical protein
SCNpilot_BF_INOC_scaffold_219_125
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


154551..154997
DNA (447bp) protein (149aa)
50S ribosomal protein L15 n=1 Tax=Proteiniphilum acetatigenes RepID=UPI00036E3613
rplO; 50S ribosomal protein L15; K02876 large subunit ribosomal protein L15 Tax=GWC2_Bacteroidetes_46_850_curated
ribosomal protein L15
SCNpilot_BF_INOC_scaffold_219_126
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


155002..156324
DNA (1323bp) protein (441aa)
preprotein translocase subunit SecY n=1 Tax=Proteiniphilum acetatigenes RepID=UPI000367F17C
secY; preprotein translocase subunit SecY; K03076 preprotein translocase subunit SecY Tax=GWC2_Bacteroidetes_46_850_curated
preprotein translocase, SecY subunit rbh
SCNpilot_BF_INOC_scaffold_219_127
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

156349..157128
DNA (780bp) protein (260aa)
methionine aminopeptidase; K01265 methionyl aminopeptidase [EC:3.4.11.18] Tax=GWC2_Bacteroidetes_46_850_curated
map; Methionine aminopeptidase (EC:3.4.11.18)
methionine aminopeptidase n=1 Tax=Proteiniphilum acetatigenes RepID=UPI000379DA06
SCNpilot_BF_INOC_scaffold_219_128
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

157145..157363
DNA (219bp) protein (73aa)
Translation initiation factor IF-1 id=3592542 bin=GWC2_Bacteroidetes_46_850 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Bacteroidetes_46_850 organism_group=Bacteroidetes
infA; translation initiation factor IF-1; K02518 translation initiation factor IF-1 Tax=GWC2_Bacteroidetes_46_850_curated
hypothetical protein
SCNpilot_BF_INOC_scaffold_219_129
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

157564..157680
DNA (117bp) protein (39aa)
50S ribosomal protein L36 id=3592539 bin=GWC2_Bacteroidetes_46_850 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=GWC2_Bacteroidetes_46_850 organism_group=Bacteroidetes
50S ribosomal protein L36 Tax=GWC2_Bacteroidetes_46_850_curated
hypothetical protein
SCNpilot_BF_INOC_scaffold_219_130
Porphyromonadaceae bacterium ING2-E5B, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


157704..158084
DNA (381bp) protein (127aa)
30S ribosomal protein S13 n=1 Tax=Proteiniphilum acetatigenes RepID=UPI00036AA6C2
rpsM; 30S ribosomal protein S13
30S ribosomal protein S13 {ECO:0000256|HAMAP-Rule:MF_01315}; TaxID=1562970 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; unclassified Porphyromonadaceae.;" source="
SCNpilot_BF_INOC_scaffold_219_131
Porphyromonadaceae bacterium ING2-E5B, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


158098..158487
DNA (390bp) protein (130aa)
30S ribosomal protein S11 n=1 Tax=Proteiniphilum acetatigenes RepID=UPI0003813001
rpsK; 30S ribosomal protein S11
30S ribosomal protein S11 {ECO:0000256|HAMAP-Rule:MF_01310}; TaxID=1562970 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; unclassified Porphyromonadaceae.;" source="
SCNpilot_BF_INOC_scaffold_219_132
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


158614..159222
DNA (609bp) protein (203aa)
30S ribosomal protein S4 n=1 Tax=Proteiniphilum acetatigenes RepID=UPI00035D5288
rpsD; 30S ribosomal protein S4; K02986 small subunit ribosomal protein S4 Tax=GWC2_Bacteroidetes_46_850_curated
rpsD; 30S ribosomal protein S4
SCNpilot_BF_INOC_scaffold_219_133
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

159227..160228
DNA (1002bp) protein (334aa)
DNA-directed RNA polymerase subunit alpha (EC:2.7.7.6); K03040 DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] Tax=GWC2_Bacteroidetes_46_850_curated
rpoA; DNA-directed RNA polymerase subunit alpha (EC:2.7.7.6)
DNA-directed RNA polymerase subunit alpha n=1 Tax=Proteiniphilum acetatigenes RepID=UPI00036E4F12
SCNpilot_BF_INOC_scaffold_219_134
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


160237..160860
DNA (624bp) protein (208aa)
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI000369528D
rplQ; 50S ribosomal protein L17; K02879 large subunit ribosomal protein L17 Tax=GWC2_Bacteroidetes_46_850_curated
rplQ; 50S ribosomal protein L17
SCNpilot_BF_INOC_scaffold_219_135
Porphyromonadaceae bacterium ING2-E5B, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

161145..162383
DNA (1239bp) protein (413aa)
ndh; NADH dehydrogenase (EC:1.6.99.3)
NADH dehydrogenase {ECO:0000313|EMBL:CEA15478.1}; EC=1.6.99.3 {ECO:0000313|EMBL:CEA15478.1};; TaxID=1562970 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; unclassifi
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI00036564F4
SCNpilot_BF_INOC_scaffold_219_136
Odoribacter sp. CAG:788, Odoribacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(162389..163066)
DNA (678bp) protein (226aa)
Two-component system response regulator n=1 Tax=Odoribacter sp. CAG:788 RepID=R5PIU9_9PORP
Two-component system response regulator {ECO:0000313|EMBL:CCZ09866.1}; TaxID=1262909 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Odoribacter; environmental sample
two-component system response regulator
SCNpilot_BF_INOC_scaffold_219_137
Odoribacter sp. CAG:788, Odoribacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(163078..164463)
DNA (1386bp) protein (462aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1262909 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Odoribac
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI00037A194A
two-component system sensor histidine kinase
SCNpilot_BF_INOC_scaffold_219_138
unknown

Not on your lists

164663..164836
DNA (174bp) protein (58aa)

This feature has no annotations

SCNpilot_BF_INOC_scaffold_219_139
Bacteroides cellulosilyticus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

164899..166449
DNA (1551bp) protein (517aa)
Uncharacterized protein n=2 Tax=Bacteroides cellulosilyticus RepID=I9PL83_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY17043.1}; TaxID=997874 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides cellulosilyticus CL
hypothetical protein
SCNpilot_BF_INOC_scaffold_219_140
unknown

Not on your lists

166522..166695
DNA (174bp) protein (58aa)

This feature has no annotations

SCNpilot_BF_INOC_scaffold_219_141
Pedobacter sp. V48, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

166786..167916
DNA (1131bp) protein (377aa)
Peroxiredoxin n=1 Tax=Chryseobacterium sp. CF314 RepID=J2T1I2_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:ETZ24124.1}; TaxID=509635 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter sp. V4
disulfide interchange protein
SCNpilot_BF_INOC_scaffold_219_142
Odoribacter sp. CAG:788, Odoribacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

168633..168941
DNA (309bp) protein (103aa)
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI00038245B7
Uncharacterized protein {ECO:0000313|EMBL:CCZ09240.1}; TaxID=1262909 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Odoribacter; environmental samples.;" source="Odo
SCNpilot_BF_INOC_scaffold_219_143
Bacteroides pyogenes, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

168967..171177
DNA (2211bp) protein (737aa)
ABC transporter, ATP-binding protein n=1 Tax=Bacteroides pyogenes F0041 RepID=U2CCV0_9BACE
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:ERI88319.1}; TaxID=1321819 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides pyoge
ABC transporter ATP-binding protein
SCNpilot_BF_INOC_scaffold_219_144
Tannerella forsythia, Tannerella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

171201..172559
DNA (1359bp) protein (453aa)
Putative uncharacterized protein n=1 Tax=Tannerella forsythia (strain ATCC 43037 / JCM 10827 / FDC 338) RepID=G8UHM7_TANFA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEW20437.1}; TaxID=203275 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Tannerella.;" source="Tannerella forsythia (strain
SCNpilot_BF_INOC_scaffold_219_145
Parabacteroides sp. 20_3, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

172638..173474
DNA (837bp) protein (279aa)
Uncharacterized protein n=2 Tax=Parabacteroides RepID=E1Z176_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EFK60351.1}; TaxID=469591 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. 20_
hypothetical protein
SCNpilot_BF_INOC_scaffold_219_146
Bacteroides uniformis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

173512..174519
DNA (1008bp) protein (336aa)
Glycosyl transferase family 2 n=5 Tax=Bacteroides RepID=E5VEM7_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY73089.1}; TaxID=997890 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides uniformis CL03T12C3
hypothetical protein
SCNpilot_BF_INOC_scaffold_219_147
unknown

Not on your lists

174467..174583
DNA (117bp) protein (39aa)

This feature has no annotations

SCNpilot_BF_INOC_scaffold_219_148
unknown

Not on your lists

174589..175446
DNA (858bp) protein (286aa)

This feature has no annotations

SCNpilot_BF_INOC_scaffold_219_149
unknown

Not on your lists

175774..175956
DNA (183bp) protein (61aa)

This feature has no annotations

SCNpilot_BF_INOC_scaffold_219_150
Tannerella sp. oral taxon BU063, Tannerella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

176033..176890
DNA (858bp) protein (286aa)
Uncharacterized protein n=1 Tax=Bacteroides sp. 3_1_33FAA RepID=D1K3E8_9BACE
Uncharacterized protein {ECO:0000313|EMBL:ETK11286.1}; TaxID=1411915 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Tannerella.;" source="Tannerella sp. oral taxon B
hypothetical protein
Displaying items 121-150 of 264 in total

View Taxonomy