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SCNpilot_BF_INOC_scaffold_2108_5

Organism: SCNpilot_BF_INOC_Bacteroidetes_44_10

near complete RP 50 / 55 MC: 5 BSCG 50 / 51 MC: 4 ASCG 13 / 38 MC: 4
Location: 4338..4898

Top 3 Functional Annotations

Value Algorithm Source
Sigma-70 family RNA polymerase sigma factor n=1 Tax=Bacteroides sp. CAG:462 RepID=R7D210_9BACE similarity UNIREF
DB: UNIREF100
  • Identity: 43.8
  • Coverage: 169.0
  • Bit_score: 150
  • Evalue 1.40e-33
RNA polymerase sigma70 factor similarity KEGG
DB: KEGG
  • Identity: 43.8
  • Coverage: 169.0
  • Bit_score: 150
  • Evalue 5.20e-34
Sigma-70 family RNA polymerase sigma factor {ECO:0000313|EMBL:CDD84340.1}; TaxID=1262740 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental sample similarity UNIPROT
DB: UniProtKB
  • Identity: 43.8
  • Coverage: 169.0
  • Bit_score: 150
  • Evalue 2.00e-33

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Taxonomy

Bacteroides sp. CAG:462 → Bacteroides → Bacteroidales → Bacteroidia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 561
TTGCAACTTTCAATTGACATCAGCGTCTTACTATTACAGATGAAAACAGAAGAGTTTACAACGAAAATACTTCCTCTGAAGAATAATCTGCTACGGGTTGCATACCGGATAACGGGCAACGCGGAGGAGGCGGAAGACGTTGTACAGGAAGTGATGTTGAAAATGTGGAGCCAGCGGGATAGCTGGGATACGATAGATAGTCTTCCTGCTTACTGTATGATGATGAGCCGAAACCTGGCTTTGGACAGGATTCGCCATTGGCGCAGCCACGAAGAAGAGGTAACGGACGATCAGCTGGCTATAGTATCCGATGCAACCCCGTTTAGTGAGGTTGCCTATAATGACCAGCGTGAATGGGTGTTGCGCCTGCTGGAAACGCTTCCCGACCTGCATCGTAAAATGATTCAGTTACGGGAAGAAGAAGAGCTAAGTTATGCCGAAATTGCCGGCGTACTTAATATAACGGAAAGTAAAGTTAAATCAGACCTGTTCAGAATACGCCAATACCTGAAACAGGCATTTGAAAAAGTAAATAGTTATGGATTACGCAATGATAAATGA
PROTEIN sequence
Length: 187
LQLSIDISVLLLQMKTEEFTTKILPLKNNLLRVAYRITGNAEEAEDVVQEVMLKMWSQRDSWDTIDSLPAYCMMMSRNLALDRIRHWRSHEEEVTDDQLAIVSDATPFSEVAYNDQREWVLRLLETLPDLHRKMIQLREEEELSYAEIAGVLNITESKVKSDLFRIRQYLKQAFEKVNSYGLRNDK*