ggKbase home page

SCNpilot_BF_INOC_scaffold_184_46

Organism: SCNpilot_BF_INOC_Bacteroidetes_44_10

near complete RP 50 / 55 MC: 5 BSCG 50 / 51 MC: 4 ASCG 13 / 38 MC: 4
Location: comp(68200..68790)

Top 3 Functional Annotations

Value Algorithm Source
Sigma-70 family RNA polymerase sigma factor n=3 Tax=Parabacteroides RepID=K5Z7A9_9PORP similarity UNIREF
DB: UNIREF100
  • Identity: 51.4
  • Coverage: 177.0
  • Bit_score: 185
  • Evalue 5.50e-44
Sigma-70, region 4 {ECO:0000313|EMBL:EEC95581.1}; TaxID=537006 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides johnsonii DS similarity UNIPROT
DB: UniProtKB
  • Identity: 51.4
  • Coverage: 177.0
  • Bit_score: 185
  • Evalue 7.70e-44
sigma-70 family RNA polymerase sigma factor similarity KEGG
DB: KEGG
  • Identity: 44.7
  • Coverage: 170.0
  • Bit_score: 157
  • Evalue 4.50e-36

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Parabacteroides johnsonii → Parabacteroides → Bacteroidales → Bacteroidia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 591
ATGAACGTTCCTACTCCCGATCATATCAGTTTATTCACAAAATTCAAAGAAGGGGATGATAATGCATATTCTTTTTTTTATCAATACTATATAAACGATTTGTATGCTTATGGGATAAGTCTGGGAGGGGAAAAAGAGATCGTGAAGGATGCCGTTCAGGATATATTTTTGAAAATATATTTCGACAAGAAAGATTTTGCGTCTATTGATCATTTAAAGTATTTTTTACTGAGATCCCTTAAAAACAGGCTCTATAATATCTACAAATCCAAGGCTGTATCAACCACGACCGATATTTCTGAAGATGTTCTCAACTTTTCCATTACGACAACGGTATTGGATCGCATTATCGATGAAGAAGACCGTACTCTTATTAAACAGCAGGTAGACGATCTCCTTTCGAAACTTACCTCTCGACAAAAAGAAGCTATATATCTCCGTTTTATGCAGGAATTAGAATATGAGGAAATTGCCGAGATAATGGACATGACACCACATGCCGCCCGGAAGTTGATTTCCCGTTCTATGAAACGGCTAAGGGACGATGAGCAACTGCTATTGATCTGTATGTTCATGCTGATTTTTCATTAA
PROTEIN sequence
Length: 197
MNVPTPDHISLFTKFKEGDDNAYSFFYQYYINDLYAYGISLGGEKEIVKDAVQDIFLKIYFDKKDFASIDHLKYFLLRSLKNRLYNIYKSKAVSTTTDISEDVLNFSITTTVLDRIIDEEDRTLIKQQVDDLLSKLTSRQKEAIYLRFMQELEYEEIAEIMDMTPHAARKLISRSMKRLRDDEQLLLICMFMLIFH*