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SCNpilot_BF_INOC_scaffold_2018_9

Organism: SCNpilot_BF_INOC_Bacteroidetes_44_10

near complete RP 50 / 55 MC: 5 BSCG 50 / 51 MC: 4 ASCG 13 / 38 MC: 4
Location: 9840..11459

Top 3 Functional Annotations

Value Algorithm Source
Pseudouridine synthase n=2 Tax=Parabacteroides RepID=N2B567_9PORP similarity UNIREF
DB: UNIREF100
  • Identity: 59.3
  • Coverage: 538.0
  • Bit_score: 666
  • Evalue 1.70e-188
RluA family pseudouridine synthase {ECO:0000313|EMBL:EOS13260.1}; TaxID=1235789 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabactero similarity UNIPROT
DB: UniProtKB
  • Identity: 59.3
  • Coverage: 538.0
  • Bit_score: 666
  • Evalue 2.40e-188
ribosomal large subunit pseudouridine synthase A similarity KEGG
DB: KEGG
  • Identity: 59.5
  • Coverage: 541.0
  • Bit_score: 665
  • Evalue 1.10e-188

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Taxonomy

Parabacteroides goldsteinii → Parabacteroides → Bacteroidales → Bacteroidia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 1620
ATGATACATTCTTTTCCCCAATCGGTTGAAACCTTTCCCTTACCGGAAAAGTTCACCTTCCCGTTCCATTATGAACCGCATCCGCTGTGTATTTCGGCGGCCAACGAGGTACAAGCTTACCTGAAGGAGCAGAAAGCGTGGACCGATGAGCTGCAGCAGGGAAAGATGTTCGGGGTACTGGTGGTACAGACTCCGGAAAATACGTTGGGATACCTGGCGGCCTTTTCGGGCAACCTGGACGGAAAAAGCTGTCACCCGTGGTTTGTTCCTCCCATCTGCGATTTTACAGATCCGGATGGCTTTTTCAGGGTGGAAGAGAGAAATATATCAGTGCTTAACAGCCGTATCGAAACATTGGAGAATGATCCGAAGTTCCTGCAGCTCAAAACACAACTTCAAGAAGCCATCGATGAGGCTGGTAACAAACTGGCTGATGCTAAAAAAGAGCTGAAAGCCGGGAAGGAGGCAAGGGATAAACGTAGAAAAGAGGGGTTGGATGAATGGAAAAACCATCAATTAATCCGCGAAAGTCAGTTTGCCAAAGCCGAATATAAACGGTTGGAGCGTTTCTGGCAAGAGAAGATTACACTTCTGAAGCAGAAAGTGGGTTTGTTTGTTCAGGAGATCGAATCTCTATGTTCGGAAAGGAAAACGCGTTCGGCAGCGCTGCAACAGCAATTATTTGATTGTTTTGTATTGATGAATGCCTACGGAGAGAGGAGAGCCTTGCGAACCGTATTTGAAGATGCTACCGGAAAGATACCTCCTGCCGGAGCGGGCGAATGTGCCGCACCAAAATTGTTGCAGTTTGCCTATATACATTCGTTGAAACCGATAGCCATGGCCGAATTCTGGTGGGGTGACTCGCCAAAGACGGAGATTCGCCGCCATGGGAATTATTATCCTGCCTGCAGCGGCAAATGCGGACCTATTCTTAATTTCATGTTGCAGGGGCTCACGGTGGAAGAGAATCCGCTGACGTGCGACAAGCACCGCCATTCATCGCCCGAGGTTGTGTATGAAGATGCCTGGATGGTAGCGGTAAACAAACCGGCCGGCATGTTGTCCGTTCCCGGAAAGCAAGCCGTTTATTCGGTGTACGACTGGATGAAAAGCAGCTACCCCGATGCCGATGGTCCGCTTATCGTTCACCGGTTGGATATGGCTACATCGGGACTCCTGTTGCTGGCTAAATCCAAAACGATTCACAAACAACTCCAAGCTATGTTCAAAAATCGCAAGATGGAGAAGCGTTACATCGCCATCGTGGATGGAGATTTGGATTGTACACAGGGAACGATAGAGCTTCCCCTTTGTCTGGATCCGGACGACCGGCCCCGGCAAATCGTTAATTACCAGCATGGCAAACCGGCCATTACCCGATACGAGGTTGTTCAGCATGAAACACATGGTATCCGGGTGGCTTTTTATCCCCAGACGGGCCGTACTCACCAGTTACGTGTTCATGCAGCGCACCCTTCCGGGTTGAATGCACCCATTGTGGGCGATTCCCTTTATGGGAAAGGGGGCGGCCGACTCTATCTTCATGCCGAGAGTCTTTCATTCAGGCATCCGGTAACCGGACAAGAGCTCTGTCTGCAAGCGAAAGCACCTTTTTAG
PROTEIN sequence
Length: 540
MIHSFPQSVETFPLPEKFTFPFHYEPHPLCISAANEVQAYLKEQKAWTDELQQGKMFGVLVVQTPENTLGYLAAFSGNLDGKSCHPWFVPPICDFTDPDGFFRVEERNISVLNSRIETLENDPKFLQLKTQLQEAIDEAGNKLADAKKELKAGKEARDKRRKEGLDEWKNHQLIRESQFAKAEYKRLERFWQEKITLLKQKVGLFVQEIESLCSERKTRSAALQQQLFDCFVLMNAYGERRALRTVFEDATGKIPPAGAGECAAPKLLQFAYIHSLKPIAMAEFWWGDSPKTEIRRHGNYYPACSGKCGPILNFMLQGLTVEENPLTCDKHRHSSPEVVYEDAWMVAVNKPAGMLSVPGKQAVYSVYDWMKSSYPDADGPLIVHRLDMATSGLLLLAKSKTIHKQLQAMFKNRKMEKRYIAIVDGDLDCTQGTIELPLCLDPDDRPRQIVNYQHGKPAITRYEVVQHETHGIRVAFYPQTGRTHQLRVHAAHPSGLNAPIVGDSLYGKGGGRLYLHAESLSFRHPVTGQELCLQAKAPF*