ggKbase home page

SCNpilot_BF_INOC_scaffold_741_15

Organism: SCNpilot_BF_INOC_Bacteroidetes_44_10

near complete RP 50 / 55 MC: 5 BSCG 50 / 51 MC: 4 ASCG 13 / 38 MC: 4
Location: comp(19753..20349)

Top 3 Functional Annotations

Value Algorithm Source
Sigma-70 family RNA polymerase sigma factor n=3 Tax=Parabacteroides RepID=K6AQ27_9PORP similarity UNIREF
DB: UNIREF100
  • Identity: 47.8
  • Coverage: 184.0
  • Bit_score: 190
  • Evalue 1.70e-45
Sigma-70 family RNA polymerase sigma factor {ECO:0000313|EMBL:EOS16262.1}; TaxID=1235789 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Pa similarity UNIPROT
DB: UniProtKB
  • Identity: 47.8
  • Coverage: 184.0
  • Bit_score: 190
  • Evalue 2.40e-45
RNA polymerase ECF-type sigma factor similarity KEGG
DB: KEGG
  • Identity: 45.1
  • Coverage: 175.0
  • Bit_score: 161
  • Evalue 3.10e-37

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Parabacteroides goldsteinii → Parabacteroides → Bacteroidales → Bacteroidia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 597
ATGTTAACAGAAGATCTGAATATTGAAAACCAACAACAGGTGTGGGACCGTTTCAGGGAAGGAGACGATACCGCCTATTCTTTGATTTATAAAGAATATGCACATGTTATGTTTTCATTCGGCATGCGGTTTACTACTGACCGCGAACTGGTAAAAGACTGCATTCAGGACATTTTTGTGAAATTATACAGTAAAAGGCAGCAGCTTAACAGCACAGGCAGCATTAAATTTTATCTGCTTGTTGCCATGAAAAACGAACTATTCAATATTTTCAGGAAAAACATCACCTTTTATTCCATTCATACGATGGAGTACGACCTGGCGTCGGACATACAACTGGAAGACAAGCTTATCAGCGACGAAGAAAGTATTGAGCGGAACAATATGATCTCTCAGATTCTCGAAATACTTACACCCAGGCAGCGAGAGGTTATCTACTACCGATACATTGAGGAGCTTTCATTTGCAGAAATCGAACAACTTATGCAAATCAACGTTCAATCCATCCAGAACCTAATCCAGCGATCTATTAAAAAAGTAAGGGAAAAGTTTCCCGATTATGTACTGTATGCACTGTTCCCTATTATATTCCAATAA
PROTEIN sequence
Length: 199
MLTEDLNIENQQQVWDRFREGDDTAYSLIYKEYAHVMFSFGMRFTTDRELVKDCIQDIFVKLYSKRQQLNSTGSIKFYLLVAMKNELFNIFRKNITFYSIHTMEYDLASDIQLEDKLISDEESIERNNMISQILEILTPRQREVIYYRYIEELSFAEIEQLMQINVQSIQNLIQRSIKKVREKFPDYVLYALFPIIFQ*