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SCNpilot_BF_INOC_scaffold_161_6

Organism: SCNpilot_BF_INOC_Leifsonia_70_13

near complete RP 47 / 55 MC: 1 BSCG 45 / 51 ASCG 9 / 38
Location: comp(3018..3554)

Top 3 Functional Annotations

Value Algorithm Source
50S ribosomal protein L6 n=1 Tax=Salinibacterium sp. PAMC 21357 RepID=UPI00028A3176 similarity UNIREF
DB: UNIREF100
  • Identity: 88.2
  • Coverage: 178.0
  • Bit_score: 314
  • Evalue 5.40e-83
50S ribosomal protein L6 {ECO:0000256|HAMAP-Rule:MF_01365, ECO:0000256|RuleBase:RU003870}; TaxID=312284 species="Bacteria; Actinobacteria.;" source="marine actinobacterium PHSC20C1.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 88.2
  • Coverage: 178.0
  • Bit_score: 314
  • Evalue 1.30e-82
rplF; 50S ribosomal protein L6 similarity KEGG
DB: KEGG
  • Identity: 84.3
  • Coverage: 178.0
  • Bit_score: 303
  • Evalue 4.60e-80

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Taxonomy

marine actinobacterium PHSC20C1 → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 537
ATGTCACGAATCGGACGCCTCCCCATCGACGTGCCCGCGAACGTCACCGTGACGATCGACGGCCAGGACGTCACCGTCAAGGGCCCCAAGGGCGAGCTCGCGCTCACCGTCAAGAGCCCCATCGAGGTCAAGCTGGAGGACGGGCAGGTGCTCGTCACCCGCCCCGACGACGAGCGCGAGTCGCGTTCGCTGCACGGCCTCACCCGCACCCTCATCGCGAACCAGATCATCGGCGTGACCGAGGGCTACTCCAAGAGCCTCGAGGTCGTCGGCACCGGATACCGCGTTCAGTCGAAGGGCAGCTCGGTCGAGTTCGCGCTCGGCTACTCGCACTCCATCACCGTCGACCCGCCCGCCGGCATCACCTTCGAGGTCGAGGGCAACAACAAGCTCCACGTTCGCGGCATCGACAAGCAGGCCGTGGGCGAGGTGGCCGCCAACATCCGGAAGCTGCGCAAGCCCGAGCCCTACAAGGGCAAGGGTGTTCGCTACTCCGGTGAGGTCGTCCGCCGCAAGGCCGGAAAGAGTGGTAAGTGA
PROTEIN sequence
Length: 179
MSRIGRLPIDVPANVTVTIDGQDVTVKGPKGELALTVKSPIEVKLEDGQVLVTRPDDERESRSLHGLTRTLIANQIIGVTEGYSKSLEVVGTGYRVQSKGSSVEFALGYSHSITVDPPAGITFEVEGNNKLHVRGIDKQAVGEVAANIRKLRKPEPYKGKGVRYSGEVVRRKAGKSGK*