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SCNpilot_BF_INOC_scaffold_161_461

Organism: SCNpilot_BF_INOC_Leifsonia_70_13

near complete RP 47 / 55 MC: 1 BSCG 45 / 51 ASCG 9 / 38
Location: comp(522359..522796)

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, AsnC family id=7720343 bin=CNBR_ACT species=Clavibacter michiganensis genus=Clavibacter taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=CNBR_ACT organism_group=Actinobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 82.9
  • Coverage: 146.0
  • Bit_score: 241
  • Evalue 4.80e-61
AsnC family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 82.1
  • Coverage: 145.0
  • Bit_score: 239
  • Evalue 6.70e-61
Putative transcriptional regulator, AsnC family {ECO:0000313|EMBL:CAN00655.1}; TaxID=443906 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Clavibacter.;" source="Clavibacter mich similarity UNIPROT
DB: UniProtKB
  • Identity: 82.1
  • Coverage: 145.0
  • Bit_score: 239
  • Evalue 3.30e-60

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Taxonomy

Clavibacter michiganensis → Clavibacter → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 438
GTGGACAACATCGACTACGGCATCCTCGACATGCTCCGCCAGAACTCACGCGCCGGCTACGGCGACATCGGCGACCGGGTGGGGCTCTCGGCATCCGCGGTGAAACGGCGCGTCGACCGCCTCGTCGCCGACGGCGTCATCCGGGCCTTCACGATCCAGGTCGACCCGGCCGTCGACGGGATGGCGACGGAGGCCTACGTGGAGCTGTTCTGCCGCGGCACAGTCGCCCCCGACGAGCTCAGGCGCATCCTGTCGCAGGTGCCGGAGGTGGTGGACGCCGCGACGGTCACGGGCTCGGCGGACGCCGTGGTGCACATCCGCTCGCGCGACATCCCCTCGCTCGAGGACGCGCTCGAGCGGGTGCGCATCGCGCCGAGCGTCGACCACACCCGCAGCGCGATCGTGCTGAGCCGCCTCATCCACCGCAGCTACGACTGA
PROTEIN sequence
Length: 146
VDNIDYGILDMLRQNSRAGYGDIGDRVGLSASAVKRRVDRLVADGVIRAFTIQVDPAVDGMATEAYVELFCRGTVAPDELRRILSQVPEVVDAATVTGSADAVVHIRSRDIPSLEDALERVRIAPSVDHTRSAIVLSRLIHRSYD*