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SCNpilot_BF_INOC_scaffold_551_7

Organism: SCNpilot_BF_INOC_Leifsonia_70_13

near complete RP 47 / 55 MC: 1 BSCG 45 / 51 ASCG 9 / 38
Location: comp(8963..10198)

Top 3 Functional Annotations

Value Algorithm Source
putative MFS permease; K08156 MFS transporter, DHA1 family, arabinose polymer transporter id=7719416 bin=CNBR_ACT species=Clavibacter michiganensis genus=Clavibacter taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=CNBR_ACT organism_group=Actinobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 68.6
  • Coverage: 401.0
  • Bit_score: 545
  • Evalue 3.30e-152
efflux protein similarity KEGG
DB: KEGG
  • Identity: 64.5
  • Coverage: 406.0
  • Bit_score: 504
  • Evalue 3.10e-140
Putative integral membrane efflux protein {ECO:0000313|EMBL:CAQ02160.1}; TaxID=31964 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Clavibacter.;" source="Clavibacter michiganens similarity UNIPROT
DB: UniProtKB
  • Identity: 64.5
  • Coverage: 406.0
  • Bit_score: 504
  • Evalue 1.60e-139

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Taxonomy

Clavibacter michiganensis → Clavibacter → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1236
GTGACCGCCGCATCCGCCCCCGCCCTCTCCCCGGCGCGCGTGCGTCTCGCGCTGCTGTCGCTCGCCCTCGGCGGCTTCGGCATCGGCGCGACCGAGTTCGTCGCGATGGGGCTGCTGCCGCAGATCGCCCGCGATCTGCTCCCCACCACGTGGGCCCAGGCCCCCGACGACGCGATCGCGCAGGCCGGGGTGATGATCGCCGCGTATGCGCTCGGCGTCGTCGTGGGTGCCCCGACGATCGCCGTCTTCGCGGCGCGGATGCCGCGTCGGCGGATCCTGCTGGGGCTCGCGGTCGCGTTCACGGTCGGTACCGCCGCATCCGCTCTCGCCCCGAGCTTCGGGCTCGTCGTGCTGTTCCGCTTCCTGGCCGCGCTGCCGCACGGCGCCTACTTCGGCATCGCGGCGCTCGTGGCCGCTTCGCTCATGGGACCCGGCAAGCGCGGCCGCGGGGTCGCCCTCGTGCTCTCCGGTCTCACCGTCGCGAACGTCGTCGGGGTGCCGCTCATCACCTTCCTCGGGCAGCAGTCGGGGTGGCGCATCGCCTACCTCGCGGTCGCCGCGATCTTCGCCGTCGCGGTGGTCGCGATCGCGCTCACGGTGCCCTGGCAGGCGGGCGACCCGGATGCGACCCCGCGTCGCGAGCTCGGCGCCTTCCGTCGTCCGGCGGTATGGTTCGCGCTGCTCACCGGCTCGGTCGGCTTCACCGGCTTCTTCGCGGTCTACAGCTACGTGGCCCCCCTCACGACCGAGGTGACGGGGCTCCCGGAGTCGACGGTGCCATGGGCGCTCGTGACGCTCGGGCTCGGGATGACGGTCGGTAACATGGTCGGCGGCTGGGCGGCGGACCGCGGCGTCCTGCGGGCGCTGTTCGTCTGCTTCGCCGTGTTCGCGGTCGTGCTCACCGGGTTGGCCCTCACCGCGCCGTGGCCGGTCGGACTCTTCGTGTTCCTGTTCGGTGTCGGGGGTGCCGCGGCGGCGCTGTCACCGGCCATCCAGACGCGCCTCATGGACGTCGCGGGCGACAGCCAGACCCTCGCGGCCGCGGTCAACCACTCGGCGCTCAACATCGGCAACGCGCTCGGGGCGTTCCTCGGCGGTGCGGTCATCGCGGCAGGCTGGGGCTACCTCGCCCCCCCCTGGGTGGGGTTGGCGATGTGCGTGCCCGGCATCCTGCTCGCGCTCGGCGGGGCCGCCGTGTCCGCGGCGGGCGAGCGCCGGGCGGCCGCGACCGTCTAG
PROTEIN sequence
Length: 412
VTAASAPALSPARVRLALLSLALGGFGIGATEFVAMGLLPQIARDLLPTTWAQAPDDAIAQAGVMIAAYALGVVVGAPTIAVFAARMPRRRILLGLAVAFTVGTAASALAPSFGLVVLFRFLAALPHGAYFGIAALVAASLMGPGKRGRGVALVLSGLTVANVVGVPLITFLGQQSGWRIAYLAVAAIFAVAVVAIALTVPWQAGDPDATPRRELGAFRRPAVWFALLTGSVGFTGFFAVYSYVAPLTTEVTGLPESTVPWALVTLGLGMTVGNMVGGWAADRGVLRALFVCFAVFAVVLTGLALTAPWPVGLFVFLFGVGGAAAALSPAIQTRLMDVAGDSQTLAAAVNHSALNIGNALGAFLGGAVIAAGWGYLAPPWVGLAMCVPGILLALGGAAVSAAGERRAAATV*