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SCNpilot_BF_INOC_scaffold_551_21

Organism: SCNpilot_BF_INOC_Leifsonia_70_13

near complete RP 47 / 55 MC: 1 BSCG 45 / 51 ASCG 9 / 38
Location: comp(25052..25735)

Top 3 Functional Annotations

Value Algorithm Source
sigH; ECF subfamily RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily id=7719432 bin=CNBR_ACT species=unknown genus=unknown taxon_order=unknown taxon_class=Actinobacteria phylum=Actinobacteria tax=CNBR_ACT organism_group=Actinobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 79.7
  • Coverage: 192.0
  • Bit_score: 311
  • Evalue 7.70e-82
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000716}; TaxID=1529318 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Cryobacterium.;" source="Cryobacterium sp. MLB-32.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 70.9
  • Coverage: 227.0
  • Bit_score: 307
  • Evalue 2.00e-80
RNA polymerase sigma factor RpoE similarity KEGG
DB: KEGG
  • Identity: 70.0
  • Coverage: 223.0
  • Bit_score: 301
  • Evalue 1.70e-79

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Taxonomy

Cryobacterium sp. MLB-32 → Cryobacterium → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 684
GTGCTGGTGCTGGACGTGCCGACCATCGGCGGGCGCACGGGAGCGCTCGGCATAGCCTCGACGCCGATGGCTGACAGCGCGCGCCCCGAGCACACCCCCGACGAGCTGCGGAGGCTGTTCGCCGAGCAGGCGATCCCGTTCATGGACCAGCTCTACGCGGCGGCGATGCGGATGACCCGCAACCCCGCCGACGCCGGCGACCTCGTGCAGGAGACCTACACGAAGGCGTTCGCCGCCTACGCCGGCTTCGAGCAGGGAACCAACCTCAAGGCGTGGCTGTACCGCATCCTCACCAACACCTACATCAACAGCTACCGCAAGAACCAGCGCAGCCCCTACCAGGGCACCCTCGACGACCTCGAGGACTGGCAGCTGGGCTCGGCCGAGTCCCTCACCCAGGGGCGCACCACCCGATCCGCCGAAGCCGAGGCGATCGACCACCTCCCCGACAGCGACGTCAAGGAGGCGCTCCAGTCGATCCCCGAGGACTTCCGACTCGCCGTGTACCTCGCGGACGTCGAAGGCTTCTCCTACCAGGAGATCGCGGACATCATGAAGACCCCCGTCGGCACCGTCATGAGCCGACTCCACCGCGGACGCCGCCTCCTGCGCGAGCGCCTCGCCGAATACGCCCGCGAGCGTGGGTACACCGCCGCGGACACGTCCCCCGGGAGCACGAGATGA
PROTEIN sequence
Length: 228
VLVLDVPTIGGRTGALGIASTPMADSARPEHTPDELRRLFAEQAIPFMDQLYAAAMRMTRNPADAGDLVQETYTKAFAAYAGFEQGTNLKAWLYRILTNTYINSYRKNQRSPYQGTLDDLEDWQLGSAESLTQGRTTRSAEAEAIDHLPDSDVKEALQSIPEDFRLAVYLADVEGFSYQEIADIMKTPVGTVMSRLHRGRRLLRERLAEYARERGYTAADTSPGSTR*