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SCNpilot_BF_INOC_scaffold_920_9

Organism: SCNpilot_BF_INOC_Leifsonia_70_13

near complete RP 47 / 55 MC: 1 BSCG 45 / 51 ASCG 9 / 38
Location: 9433..10431

Top 3 Functional Annotations

Value Algorithm Source
Tyrosine recombinase XerD n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2T570_LEIAQ similarity UNIREF
DB: UNIREF100
  • Identity: 67.1
  • Coverage: 298.0
  • Bit_score: 378
  • Evalue 9.70e-102
Tyrosine recombinase XerC {ECO:0000256|HAMAP-Rule:MF_01808}; TaxID=1291006 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Clavibacter.;" source="Clavibacter cf. michiganensis LMG similarity UNIPROT
DB: UniProtKB
  • Identity: 61.0
  • Coverage: 326.0
  • Bit_score: 379
  • Evalue 4.70e-102
xerD; site-specific tyrosine recombinase XerD similarity KEGG
DB: KEGG
  • Identity: 61.5
  • Coverage: 322.0
  • Bit_score: 376
  • Evalue 6.10e-102

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Taxonomy

Clavibacter michiganensis → Clavibacter → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 999
ATGCCCGCGGCTGACCCGACGCCCGAGACGGGCGTCGGCGCTGGGGGCGCGCGGAGGCCGGAAACGGCCTCCGCCCTGAGCGCCACCGCGCTCAGGCGGCAGAACGACCGCTACCTGCGTCACCTCGAGATCGAGCGCGGGCTCTCCCCGAACTCGGTGGCGGCCTACCGACGCGACCTGCGGGGGTTCCTCGAGGCGCTCGAGACCCGCGGCGTGACGGACGCGGCCGCGCTGGATGCGGACACCGTGCGCAGCTACGTCGTGAGCCTGCGCGACCGGGAGGTGCCGCTCGCCGCGAGCTCCACGGCGCGCGTGATCTCCTCCATCCGCGGGTTCACGCGGTTCCTCGTGGAGGAGGGGGTGCTGCAGGCCGACCCCGCCGAGTCGCTCATCGCGCCGAAGCTCCCGAAGCGGCTGCCGAAGGCGCTCACGCAGGCACAGGTCGAGGCGCTCCTCGCCGCGACCGATGGCGACGACCCGGTGCGGCTGCGCGACAAGGCCCTCCTGGAGCTGCTCTACGCGACGGGTGCGCGCGTCTCGGAGGCCGTGACGCTCGACGTGGACGACCTCGTGGGCGCCGAGGGCACTCCGGAGCTCATCCGGGTGATCGGCAAGGGCGACAAGCAGCGGATCGTGCCGCTCGGCTCCTTCGCGCGCGCCGCGATCGAGGCGTACCTGGTGCGGGCGCGGCCGCTGCTCGTGGCGGGTGCGCGGGCGACGCCGGCGCTCTTCGTCGGTGCTCGCGGCGCGCGCCTCAGCAGGCAGAACGCGTGGCTCATCATCCGTTCCGCGGCCGAGCGGGCGGGTCTCACGGTGGAGGTGTCGCCGCACAGCCTGCGGCACTCCTTCGCGACGCATCTGCTCGCCGGCGGAGCGGATGTGCGGGTCGTCCAGGAGCTGCTGGGCCACGCATCCGTCGCGACGACGCAGCTGTACACGCACGTGACGATCGACGGGTTGCGCGACGTGTACCAGCAGGCGCACCCGCGGGCGCGGTGA
PROTEIN sequence
Length: 333
MPAADPTPETGVGAGGARRPETASALSATALRRQNDRYLRHLEIERGLSPNSVAAYRRDLRGFLEALETRGVTDAAALDADTVRSYVVSLRDREVPLAASSTARVISSIRGFTRFLVEEGVLQADPAESLIAPKLPKRLPKALTQAQVEALLAATDGDDPVRLRDKALLELLYATGARVSEAVTLDVDDLVGAEGTPELIRVIGKGDKQRIVPLGSFARAAIEAYLVRARPLLVAGARATPALFVGARGARLSRQNAWLIIRSAAERAGLTVEVSPHSLRHSFATHLLAGGADVRVVQELLGHASVATTQLYTHVTIDGLRDVYQQAHPRAR*