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SCNpilot_BF_INOC_scaffold_1316_22

Organism: SCNpilot_BF_INOC_Solirubrobacterales_68_7

near complete RP 50 / 55 MC: 3 BSCG 47 / 51 MC: 1 ASCG 13 / 38 MC: 1
Location: 20859..21473

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Frankia sp. (strain EuI1c) RepID=E3J9T6_FRASU similarity UNIREF
DB: UNIREF100
  • Identity: 47.0
  • Coverage: 215.0
  • Bit_score: 187
  • Evalue 1.10e-44
ECF subfamily RNA polymerase sigma-24 factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily Tax=RBG_16_Deltaproteobacteria_71_12_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 52.2
  • Coverage: 203.0
  • Bit_score: 207
  • Evalue 2.60e-50
ECF subfamily RNA polymerase sigma-24 subunit similarity KEGG
DB: KEGG
  • Identity: 47.0
  • Coverage: 215.0
  • Bit_score: 187
  • Evalue 3.20e-45

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Taxonomy

RBG_16_Deltaproteobacteria_71_12_curated → Deltaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 615
ATGTTCCGCCGTCGCCCCGACCCCGCAGCAGCCGCCGAAGCAGAGCTCGTGACGAGGTTGCGGGCGGGGGAGGAGGCGGCCTTCGTCGAGCTCGCCGGGCGCCACCAGGCGAGCATGCTGCGGCTCGCCTCGACCTTCGTGCCGAACGCGGCGGTCGCCGAGGAGGTGGTGCAGGACACCTGGGTCGCGGTCCTGCGCGGGATCGACCGCTTCGACGGGCGGGCGGCGTTCAAGACCTGGCTGCTGGCGATCCTCGTCAACCGGGCCAAGAGCACCGGCATCAGTGAGGCGCGGAGCCTGCCGATCGGCGACGCCGGCCCCGCGGTCGACGGCTCGCGCTTCGACGCGGGCGGCGCTTGGTCCTCACCGCCGCGCCACTGGATCGAGGAGAGCGAGGACCGGCTGCTGGCGAGCGGCCTGCGCGGGCGGCTGGAGTCGGCGCTGCGGAGGTTGCCGTCGCGGCAGCGGGCGATCGTCATCCTGCGCGATGTGGACGGCATGAGCAGCGAGGAGGTGTGCAGGGTGCTCGAGATCAGCGCGGGCAACCAGCGGGTGCTGCTCCACCGCGCCCGTTCCCACCTGCGCGCCGCGGTCGAGGGGTTCGTCGACGCATGA
PROTEIN sequence
Length: 205
MFRRRPDPAAAAEAELVTRLRAGEEAAFVELAGRHQASMLRLASTFVPNAAVAEEVVQDTWVAVLRGIDRFDGRAAFKTWLLAILVNRAKSTGISEARSLPIGDAGPAVDGSRFDAGGAWSSPPRHWIEESEDRLLASGLRGRLESALRRLPSRQRAIVILRDVDGMSSEEVCRVLEISAGNQRVLLHRARSHLRAAVEGFVDA*