ggKbase home page

SCNpilot_BF_INOC_scaffold_1811_27

Organism: SCNpilot_BF_INOC_Solirubrobacterales_68_7

near complete RP 50 / 55 MC: 3 BSCG 47 / 51 MC: 1 ASCG 13 / 38 MC: 1
Location: 22238..22822

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Frankia sp. BMG5.12 RepID=UPI000371BDB3 similarity UNIREF
DB: UNIREF100
  • Identity: 48.5
  • Coverage: 165.0
  • Bit_score: 152
  • Evalue 5.10e-34
putative RNA polymerase ECF-subfamily sigma factor similarity KEGG
DB: KEGG
  • Identity: 46.2
  • Coverage: 171.0
  • Bit_score: 144
  • Evalue 3.90e-32
Putative RNA polymerase ECF-subfamily sigma factor {ECO:0000313|EMBL:BAL92747.1}; TaxID=512565 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinop similarity UNIPROT
DB: UniProtKB
  • Identity: 46.2
  • Coverage: 171.0
  • Bit_score: 144
  • Evalue 1.90e-31

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Actinoplanes missouriensis → Actinoplanes → Micromonosporales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 585
ATGACCACCATCGCGGGCCAGGCTCAGGCTGACGACGACATCTACCGCGGGCGCTTCGAGGCCTGCTTCGACCAGCACTACCTGGCGATCTTCGCCTTCGCCGCGCGCCGGGTCGCCGCAGGCGAGAGTGCCGAGGACGTGGTCGCCGACACCTTCGCGATCGCTTGGCGCAGGCGCGATCGCATCCCGGACCCGGCGCTGCCCTGGCTCTACGCGATCGCCGCCAACGTGATCGCGAACCAGCGTCGCTCGACCGGCCGCCGCCGCAATCTCGACCAGCGCCTCGCCGAGGAGGCGGGGGTTCGGCCCCATGGGGGCGACCCGGCCGACTCGCTCGCCGGACGTGACGAGCTGGCGGCCGCGTTCGCCGGGCTGGCGGAGGCCGATCGTGAGCTGCTGCGGCTGGTGGCCTGGGAGGGACTCTCGGCCCGGGACGCCGCCCTGGTGGTCGGCTGCTCGCCGGGCGCCGCGCGGGTGCGCCTCCATCGCGCCCGTCGCAAGCTCGCAAAGGAACTGAAGAACGCCGGAGACGGGGCCGCCGAGGCACCTCGGACCTCCGCCCGGCCGGCCGAGGAGGGCTCATGA
PROTEIN sequence
Length: 195
MTTIAGQAQADDDIYRGRFEACFDQHYLAIFAFAARRVAAGESAEDVVADTFAIAWRRRDRIPDPALPWLYAIAANVIANQRRSTGRRRNLDQRLAEEAGVRPHGGDPADSLAGRDELAAAFAGLAEADRELLRLVAWEGLSARDAALVVGCSPGAARVRLHRARRKLAKELKNAGDGAAEAPRTSARPAEEGS*