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SCNpilot_BF_INOC_scaffold_2094_4

Organism: SCNpilot_BF_INOC_Solirubrobacterales_68_7

near complete RP 50 / 55 MC: 3 BSCG 47 / 51 MC: 1 ASCG 13 / 38 MC: 1
Location: 3106..3375

Top 3 Functional Annotations

Value Algorithm Source
shikimate 5-dehydrogenase (EC:1.1.1.25) similarity KEGG
DB: KEGG
  • Identity: 44.4
  • Coverage: 90.0
  • Bit_score: 84
  • Evalue 1.70e-14
Shikimate dehydrogenase (NADP(+)) {ECO:0000256|HAMAP-Rule:MF_00222, ECO:0000256|SAAS:SAAS00228653}; Short=SDH {ECO:0000256|HAMAP-Rule:MF_00222};; EC=1.1.1.25 {ECO:0000256|HAMAP-Rule:MF_00222, ECO:0000 similarity UNIPROT
DB: UniProtKB
  • Identity: 44.4
  • Coverage: 90.0
  • Bit_score: 84
  • Evalue 8.40e-14
Shikimate dehydrogenase n=1 Tax=Thermobaculum terrenum (strain ATCC BAA-798 / YNP1) RepID=D1CDM4_THET1 similarity UNIREF
DB: UNIREF100
  • Identity: 44.4
  • Coverage: 90.0
  • Bit_score: 84
  • Evalue 7.90e-14

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Taxonomy

Thermobaculum terrenum → Thermobaculum → Bacteria

Sequences

DNA sequence
Length: 270
TTGATCGTCAATACCACCGCCGTCGGGCTCGGCGGCGAGGATCCCTTCGAGCACCTGCCGCTGAGCGCCGACTCGTTCAACGCCGAGCAGGTGGTGGTCGACATGGTCTACGGGGACGAGCCCAGTCCGCTCCTCACCGCCGCTGCGGCAGCGGGAGCCACCACGGTTGACGGGCTGGAGATGCTGGTGCAGCAAGGAGCGCTTTCGCTGCAGATCTGGACCGGGGAGGAACCCTCCCTCGAGGCGATGCGCGCCGCGGTTCGCCTATAG
PROTEIN sequence
Length: 90
LIVNTTAVGLGGEDPFEHLPLSADSFNAEQVVVDMVYGDEPSPLLTAAAAAGATTVDGLEMLVQQGALSLQIWTGEEPSLEAMRAAVRL*