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SCNpilot_BF_INOC_scaffold_2403_11

Organism: SCNpilot_BF_INOC_Solirubrobacterales_68_7

near complete RP 50 / 55 MC: 3 BSCG 47 / 51 MC: 1 ASCG 13 / 38 MC: 1
Location: comp(9556..9990)

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Amycolatopsis nigrescens RepID=UPI00036BE66D similarity UNIREF
DB: UNIREF100
  • Identity: 44.7
  • Coverage: 152.0
  • Bit_score: 116
  • Evalue 2.30e-23
Putative regulator of sigma factor {ECO:0000313|EMBL:EWC62494.1}; TaxID=909613 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Actinokineospora.;" source="Actinokineospora sp similarity UNIPROT
DB: UniProtKB
  • Identity: 46.8
  • Coverage: 139.0
  • Bit_score: 113
  • Evalue 3.60e-22
regulator similarity KEGG
DB: KEGG
  • Identity: 45.8
  • Coverage: 131.0
  • Bit_score: 106
  • Evalue 6.70e-21

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Taxonomy

Actinokineospora spheciospongiae → Actinokineospora → Pseudonocardiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 435
ATGCAGACGATCCATGGAGATGGGCTGAGGGCCGAATTGCCCCTCGCCCCCCTGCGAGCGGGGCGTCTCGAGTTCGGTCTCGACGACCTTCACGACATCCGCTCCCTGGTCGCCGCCGGGGCCGCGGCGGGCGGCCTGTCGCCCGGCCGCGTCTCCGACCTCGCCGCCGCCGCCTCCGAGCTGGCGGCCAACAGCATCCTCCACGGCGGTGGCCGCGGCTTGGCGACGGTCTGGGATGACGGCCGGTCGGTCTTCGTCGAGGTCGCCGACGCGGGCACGATCGTCGACCCGCTCGTCGGCAGGCGCCGCCCTGACCCGAGGGCGGAAAGCGGCCGCGGCCTCTACATCGCCAACCAGCTCTGCGACGAGGTCTCGATCGACAGCACCCGGACCGGGACCCGGATCCGACTGCGGATGGGGACCGAGGCCGGCTAG
PROTEIN sequence
Length: 145
MQTIHGDGLRAELPLAPLRAGRLEFGLDDLHDIRSLVAAGAAAGGLSPGRVSDLAAAASELAANSILHGGGRGLATVWDDGRSVFVEVADAGTIVDPLVGRRRPDPRAESGRGLYIANQLCDEVSIDSTRTGTRIRLRMGTEAG*