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SCNpilot_BF_INOC_scaffold_2823_11

Organism: SCNpilot_BF_INOC_Solirubrobacterales_68_7

near complete RP 50 / 55 MC: 3 BSCG 47 / 51 MC: 1 ASCG 13 / 38 MC: 1
Location: comp(11316..11525)

Top 3 Functional Annotations

Value Algorithm Source
cold-shock protein n=1 Tax=Hoeflea sp. 108 RepID=UPI000380A540 similarity UNIREF
DB: UNIREF100
  • Identity: 76.8
  • Coverage: 69.0
  • Bit_score: 114
  • Evalue 4.20e-23
Cold-shock protein {ECO:0000313|EMBL:EZQ16639.1}; TaxID=653930 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas bauzanensis similarity UNIPROT
DB: UniProtKB
  • Identity: 88.4
  • Coverage: 69.0
  • Bit_score: 129
  • Evalue 2.30e-27
cold-shock protein similarity KEGG
DB: KEGG
  • Identity: 78.3
  • Coverage: 69.0
  • Bit_score: 110
  • Evalue 1.70e-22

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Taxonomy

Pseudomonas bauzanensis → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 210
ATGAGCACTGGAACCGTGAAGTTTTTCAACAGCACCAAGGGCTTCGGCTTCATCGAGGTGGGCAACGGCCAGCCGGACGTGTTCGTCCATATCTCGGCTGTCGAGCGCTCCGGCATGCACACCCTCGTGGAAGGCCAGAAGGTCAGCTTCGACATCGTGCAGGACCGCCGCAACGGCAAGAGCGCAGCCGAGAACCTGCAGGCTGCCTAA
PROTEIN sequence
Length: 70
MSTGTVKFFNSTKGFGFIEVGNGQPDVFVHISAVERSGMHTLVEGQKVSFDIVQDRRNGKSAAENLQAA*