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SCNpilot_BF_INOC_scaffold_3776_10

Organism: SCNpilot_BF_INOC_Solirubrobacterales_68_7

near complete RP 50 / 55 MC: 3 BSCG 47 / 51 MC: 1 ASCG 13 / 38 MC: 1
Location: comp(7916..8188)

Top 3 Functional Annotations

Value Algorithm Source
binding-protein-dependent transport system inner membrane protein; K10190 lactose/L-arabinose transport system permease protein id=7720115 bin=CNBR_ACT species=Serinicoccus profundi genus=Serinicoccus taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=CNBR_ACT organism_group=Actinobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 44.3
  • Coverage: 70.0
  • Bit_score: 71
  • Evalue 5.30e-10
Sugar ABC transporter permease {ECO:0000313|EMBL:KDP92025.1}; TaxID=1291006 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Clavibacter.;" source="Clavibacter cf. michiganensis LM similarity UNIPROT
DB: UniProtKB
  • Identity: 43.8
  • Coverage: 73.0
  • Bit_score: 69
  • Evalue 3.70e-09

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Taxonomy

Clavibacter michiganensis → Clavibacter → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 273
CGGGGCCGCTTCTTCGGACTTCGGCTGAGCTTGGCAATAGTCATCACGCTGGTGATGGTCTTCCCGCTCTACTGGATGATCATGACGGCGGTCTCACCGAGAGCGGATCTGTATCAAAGCGGCCTGCATCTGTGGCCCAGTCATTGGACCTGGGACAATTTCACCCTCCCGATCAAGCAGTTTCCCGTCTGGCAGTGGTTCCGCAACTCGGCGGTGATCACCATCCCGGGCGGCAGGCCGGTGAGGTCGTCGGCGAGCAGCGGCGAGGCGTAG
PROTEIN sequence
Length: 91
RGRFFGLRLSLAIVITLVMVFPLYWMIMTAVSPRADLYQSGLHLWPSHWTWDNFTLPIKQFPVWQWFRNSAVITIPGGRPVRSSASSGEA*