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SCNpilot_BF_INOC_scaffold_133_17

Organism: SCNpilot_BF_INOC_Solirubrobacterales_68_14

near complete RP 50 / 55 BSCG 49 / 51 ASCG 12 / 38
Location: comp(21122..21613)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma-24 subunit ECF subfamily n=1 Tax=Patulibacter medicamentivorans RepID=H0E4Z9_9ACTN similarity UNIREF
DB: UNIREF100
  • Identity: 43.8
  • Coverage: 162.0
  • Bit_score: 126
  • Evalue 2.50e-26
RNA polymerase sigma-24 subunit ECF subfamily {ECO:0000313|EMBL:EHN11250.1}; TaxID=1097667 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Patulibacteraceae; Patulibacter.;" s similarity UNIPROT
DB: UniProtKB
  • Identity: 44.4
  • Coverage: 162.0
  • Bit_score: 127
  • Evalue 1.60e-26
sigma-70 family RNA polymerase sigma factor similarity KEGG
DB: KEGG
  • Identity: 42.9
  • Coverage: 156.0
  • Bit_score: 104
  • Evalue 2.90e-20

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Taxonomy

Patulibacter medicamentivorans → Patulibacter → Solirubrobacterales → Thermoleophilia → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 492
GTGAACGAGAAAAGGCAAAGAACGGACGGGCCGCCACCCTTCGAGGTGGCGCTCGAGGAGCATGGGCCACGGGTCCATTCGTGGTTGACGGCCCGGGTCGGCCCGGACCGGGCGGATGACGTCTTCCAGGAGACGATGATCGCCGCGCTTTCGGCTTGGGACCGGGCCAGGGTCGAATCGGTCCGGGCCTGGCTCTTCACGATCGCCCAGAACAAGGCGATCGACGAGCAGCGGCGCGATTCCCGCCGGCCCCAACCCGAAGCGGAGATGGACGCCTGGCCGGCGGCCGAGGTGACCGACCTGCTCGGCGACCCGGTCTGGGACGAGGTGCGGGCCCTGCCCGAGAAGCAGCGGGTCGCGGTCACGCTCCGCTTCCGCGGCGACCTTACCCATCGTGAGATCGGCAGCGTGATGGAGATCTCCGAACCGGCGGCCCGCCGCAACGTATTCGAGGGTCTGAAGACCCTGCGGGAAAGGATCAGCGATGAATAG
PROTEIN sequence
Length: 164
VNEKRQRTDGPPPFEVALEEHGPRVHSWLTARVGPDRADDVFQETMIAALSAWDRARVESVRAWLFTIAQNKAIDEQRRDSRRPQPEAEMDAWPAAEVTDLLGDPVWDEVRALPEKQRVAVTLRFRGDLTHREIGSVMEISEPAARRNVFEGLKTLRERISDE*