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SCNpilot_BF_INOC_scaffold_1004

Search features with annotation key words

Displaying 26 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_BF_INOC_scaffold_1004_1
Cellulomonas flavigena, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1..156)
DNA (156bp) protein (52aa)
Xylulokinase n=1 Tax=Cellulomonas flavigena (strain ATCC 482 / DSM 20109 / NCIB 8073 / NRS 134) RepID=D5UIQ7_CELFN
xylulokinase
Xylulokinase {ECO:0000313|EMBL:ADG73556.1}; TaxID=446466 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellulomonas flavigena (strain ATCC 482 / DSM 2010
SCNpilot_BF_INOC_scaffold_1004_2
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(465..1883)
DNA (1419bp) protein (473aa)
Amidohydrolase n=1 Tax=Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC) RepID=E8TQK4_ALIDB
amidohydrolase
Amidohydrolase {ECO:0000313|EMBL:GAO24910.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp. B1.;"
SCNpilot_BF_INOC_scaffold_1004_3
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1896..2906)
DNA (1011bp) protein (337aa)
Uncharacterized protein n=1 Tax=Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC) RepID=E8TQK3_ALIDB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADV01358.1}; Flags: Precursor;; TaxID=596153 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source=
SCNpilot_BF_INOC_scaffold_1004_4
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3048..4046
DNA (999bp) protein (333aa)
Regulatory protein LysR n=1 Tax=Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC) RepID=E8TQK2_ALIDB
LysR family transcriptional regulator
Regulatory protein LysR {ECO:0000313|EMBL:ADV01357.1}; TaxID=596153 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus den
SCNpilot_BF_INOC_scaffold_1004_5
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4078..4359)
DNA (282bp) protein (94aa)
hypothetical protein id=12553925 bin=BDI species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=BDI organism_group=Betaproteobacteria
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
hypothetical protein
SCNpilot_BF_INOC_scaffold_1004_6
Acidovorax sp. NO-1, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4411..4734)
DNA (324bp) protein (108aa)
4Fe-4S ferredoxin n=1 Tax=Acidovorax sp. NO-1 RepID=H0C158_9BURK
4Fe-4S ferredoxin {ECO:0000313|EMBL:EHL21713.1}; TaxID=512030 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. NO-1.;"
4Fe-4S ferredoxin
SCNpilot_BF_INOC_scaffold_1004_7
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4791..5828
DNA (1038bp) protein (346aa)
cobalamin biosynthesis protein CobD; K02227 adenosylcobinamide-phosphate synthase [EC:6.3.1.10] id=5081266 bin=GWF1_Burkholderiales_GWF1_66_17 species=Hylemonella gracilis genus=Hylemonella taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD
adenosylcobinamide-phosphate synthase (EC:6.3.1.10); K02227 adenosylcobinamide-phosphate synthase [EC:6.3.1.10] Tax=GWE1_Burkholderiales_65_30_curated
cobalamin biosynthesis protein CobD
SCNpilot_BF_INOC_scaffold_1004_8
Polaromonas naphthalenivorans, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6005..7066
DNA (1062bp) protein (354aa)
Aminotransferase {ECO:0000313|EMBL:ABM37455.1}; EC=2.6.1.- {ECO:0000313|EMBL:ABM37455.1};; TaxID=365044 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromo
Aminotransferase n=1 Tax=Polaromonas naphthalenivorans (strain CJ2) RepID=A1VP77_POLNA
class I/II aminotransferase
SCNpilot_BF_INOC_scaffold_1004_9
Hylemonella gracilis, Hylemonella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7063..8694
DNA (1632bp) protein (544aa)
Cobyric acid synthase n=1 Tax=Hylemonella gracilis ATCC 19624 RepID=F3KV43_9BURK
Cobyric acid synthase {ECO:0000256|HAMAP-Rule:MF_00028, ECO:0000256|SAAS:SAAS00231811}; TaxID=887062 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hylemonella
cobyric acid synthase
SCNpilot_BF_INOC_scaffold_1004_10
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8700..9746
DNA (1047bp) protein (349aa)
Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_00230, ECO:0000256|SAAS:SAAS00013344}; Short=NN:DBI PRT {ECO:0000256|HAMAP-Rule:MF_00230};; EC=2.4.2.2
nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase (EC:2.4.2.21)
nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase n=2 Tax=Acidovorax sp. MR-S7 RepID=UPI00036709FC
SCNpilot_BF_INOC_scaffold_1004_11
Acidovorax sp. NO-1, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9794..11002
DNA (1209bp) protein (403aa)
Beta-lactamase n=1 Tax=Acidovorax sp. NO-1 RepID=H0BTA1_9BURK
Beta-lactamase {ECO:0000313|EMBL:EHL24381.1}; TaxID=512030 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. NO-1.;"
beta-lactamase
SCNpilot_BF_INOC_scaffold_1004_12
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11017..11817
DNA (801bp) protein (267aa)
Adenosylcobinamide-GDP ribazoletransferase {ECO:0000256|HAMAP-Rule:MF_00719, ECO:0000256|SAAS:SAAS00154501}; EC=2.7.8.26 {ECO:0000256|HAMAP-Rule:MF_00719, ECO:0000256|SAAS:SAAS00154502};; Cobalamin sy
Cobalamin synthase n=1 Tax=Variovorax paradoxus (strain S110) RepID=C5CKN9_VARPS
cobalamin-5-phosphate synthase CobS
SCNpilot_BF_INOC_scaffold_1004_13
Ramlibacter tataouinensis, Ramlibacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11814..12371
DNA (558bp) protein (186aa)
Uncharacterized protein n=1 Tax=Ramlibacter tataouinensis (strain ATCC BAA-407 / DSM 14655 / LMG 21543 / TTB310) RepID=F5Y654_RAMTT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEG92740.1}; TaxID=365046 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Ramlibacter.;" source="Ramlibacter tataouine
SCNpilot_BF_INOC_scaffold_1004_14
Achromobacter insuavis, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12387..13064)
DNA (678bp) protein (226aa)
TENA/THI-4/PQQC family protein 2 n=1 Tax=Achromobacter xylosoxidans AXX-A RepID=F7SYQ5_ALCXX
TENA/THI-4/PQQC family protein 2 {ECO:0000313|EMBL:EGP46827.1}; TaxID=1003200 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter.;" source="Achromoba
transcriptional activator, TenA family
SCNpilot_BF_INOC_scaffold_1004_15
Pseudoxanthomonas suwonensis, Pseudoxanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13186..13770
DNA (585bp) protein (195aa)
Putative uncharacterized protein n=1 Tax=Pseudoxanthomonas suwonensis (strain 11-1) RepID=E6WV06_PSEUU
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:ADV28005.1}; TaxID=743721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Pseudoxanthomonas.;" source="Pse
SCNpilot_BF_INOC_scaffold_1004_16
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13733..14572)
DNA (840bp) protein (280aa)
Alpha/beta hydrolase fold-containing protein n=1 Tax=Variovorax paradoxus B4 RepID=T1XE59_VARPD
alpha/beta hydrolase fold-containing protein
Alpha/beta hydrolase fold-containing protein {ECO:0000313|EMBL:AGU50791.1}; TaxID=1246301 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="
SCNpilot_BF_INOC_scaffold_1004_17
unknown

Not on your lists

14659..14967
DNA (309bp) protein (103aa)

This feature has no annotations

SCNpilot_BF_INOC_scaffold_1004_18
CG_Mariprof_05, Zetaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14981..15439
DNA (459bp) protein (153aa)
Uncharacterized protein n=1 Tax=mine drainage metagenome RepID=E6QC23_9ZZZZ
polyketide cyclase/dehydrase and lipid transport family protein 1 Tax=CG_Mariprof_05
polyketide cyclase/dehydrase and lipid transport family protein 1
SCNpilot_BF_INOC_scaffold_1004_19
BJP_08E140C01_10KDA_Burkholderiales_65_51, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15449..18013)
DNA (2565bp) protein (855aa)
DNA mismatch repair protein MutS n=1 Tax=Ramlibacter tataouinensis (strain ATCC BAA-407 / DSM 14655 / LMG 21543 / TTB310) RepID=F5Y4E0_RAMTT
mutS; DNA mismatch repair ATPase protein
Tax=BJP_08E140C01_10KDA_Burkholderiales_65_51
SCNpilot_BF_INOC_scaffold_1004_20
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18174..18956
DNA (783bp) protein (261aa)
hypothetical protein n=1 Tax=Pusillimonas noertemannii RepID=UPI0003685823
major facilitator superfamily MFS_1
Major facilitator superfamily MFS_1 {ECO:0000313|EMBL:CDM25688.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Caste
SCNpilot_BF_INOC_scaffold_1004_21
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18923..19354
DNA (432bp) protein (144aa)
hypothetical protein n=1 Tax=Pusillimonas noertemannii RepID=UPI0003685823
major facilitator superfamily MFS_1
Major facilitator superfamily MFS_1 {ECO:0000313|EMBL:CDM25688.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Caste
SCNpilot_BF_INOC_scaffold_1004_22
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19385..21616)
DNA (2232bp) protein (744aa)
Putative membrane protein n=1 Tax=Variovorax sp. CF313 RepID=J2K305_9BURK
Putative membrane protein {ECO:0000313|EMBL:EJL74520.1}; Flags: Precursor;; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="
hypothetical protein
SCNpilot_BF_INOC_scaffold_1004_23
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21660..23039)
DNA (1380bp) protein (460aa)
Uncharacterized protein n=1 Tax=Delftia acidovorans CCUG 15835 RepID=S2WH50_DELAC
Uncharacterized protein {ECO:0000313|EMBL:EPD37505.1}; TaxID=883100 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG
peptidase U32
SCNpilot_BF_INOC_scaffold_1004_24
Pseudomonas sp. AAC, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23176..23682
DNA (507bp) protein (169aa)
Appr-1-p processing domain-containing protein n=1 Tax=Pseudomonas sp. (strain M1) RepID=L1I0J5_PSEUO
Appr-1-p processing protein {ECO:0000313|EMBL:KES22158.1}; TaxID=1502784 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas s
hypothetical protein
SCNpilot_BF_INOC_scaffold_1004_25
unknown

Not on your lists

23794..24420
DNA (627bp) protein (209aa)

This feature has no annotations

SCNpilot_BF_INOC_scaffold_1004_26
RLO_Burkholderiales_64_33, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24598..26622
DNA (2025bp) protein (675aa)
aconitate hydratase (EC:4.2.1.3) Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_33_curated
aconitate hydratase (EC:4.2.1.3)
aconitate hydratase n=1 Tax=Acidovorax radicis RepID=UPI0002376649
Displaying 26 items

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